Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1131 ATGTGGTACAAAAAACAGTCTAGGAGAACATATGTTTGGGTAGCAAATAGAGATGACCCTGTTTCTGATAAGAACTCTGCCATGTTAACAATATTGCGTGGTAATTTAGTGCTCTTGGAGAATTGGAATCTAGTTTGGTCAACAAATTTGAGCTCTCCTAGCTCTGGTTCTGTAGAAGCTGTGCTTCTAGGTAATGGGAACCTGATATTAAGCAACAAGCCTAATGCATCGGAATCAGAATCTCTGTGGCAGAGTTTTGATCATCCAACAAATACATGGCTTCCAGGTGGTAGAATCAAACTGGACCACAAAACGAAGAAGCCTCAGTATCTGACTTCATGGAAGAACTATGAAGATCCAGCAACAGGGCAATTCTCTCTGGAACTGGACCCCAATGGAACCACTTCATATCTGATTCTATGGAACAAAACTGAACAGTATTGGACAAGTGGTCCTTGGAATGGAAATGTTTTCAGTTTGGTTCCGGAGATGAATATTAAATACTTTTACAATTTCACCTTTGTGTCGAATGAGAACGAGAGCTACTTCACCTACAACGTGTACGGCACTTCCCTACTGTCTCGTTTCGTGATGGATTTCACGGGGCAGATCAAGGAATTGACTTGGCTGGAAGATTCCCAGCAATGGAATTTGTTCTGGTCACAGCCAAGGCGCCAATGCGAGGTTTATGCTGTTTGTGGTGCATTTGCGAGCTGCACTGAGACATCCCAGCCATATTGTAATTGTGTAACTGGCTATGACCCAAAGTCACAATCTGATTGGGATCTAGGAGATTACTCAGGTGGGTGTGTGAAATCAACAAAGTTTCAATGTGAGTCATCCAATTCCTCTAATGGGGCAAAAGACATGTTTTTAACAATGCCAAACATGGCTTTGCCTGAACATGCTGAACTTGTGGGAGCAGGTAGTGTTGGTGAATGTGAGTCAACTTGCTTTAGCAACTGTTCCTGCAAAGCTTATGCTTTTAACAGCAGTGGTTGTTCATTCTGGAATGGGGATCTCTTGAATTTGCAACAGCTTACTCAGGATGATAGTACAGGACAGACTTTGTTTCTCAAACTTGCAGCATCAGAGTTTCATGATCCTAAGAGCAGCAATGGGATAAGCATTGGTGTTATTTTCGGTGCTGTTGGTGGTGGTGTTGTGGCGATTCTTCTAGCTCTTGTTGTAATTGTGCTGCTGAGGCGAAAAATGAGACGAGGTGGAGCAAGAATTATGATGGAGGGGTCATTGGCTGCATTTGCTTACAGAGATTTGCGACAGGCTACAAAGAATTTCTCAGAGAAACTGGGAGAAGGAGGTTTTGGTTCTGTCTTCAAAGGAACATTGTCTGATTCAAGTGTCGTAGCAGTAAAGAAGCTTGAAAGCATTAGCCAAGGTGAGAAGCAGTTCAGAACAGAAGTGAGCACACTTGGGACAGTCCAACATGTCAACCTTGTCAGGCTTCGTGGGTTCTGTTCTGAAGGAGCTAAGAAACTTCTGGTTTATGATTACATGCCAAACACTTCCTTGGATTCATGCCTGTTTCAGGAGAAGAAGGAAAACTCCAAAGTGATGTTGGGTTGGAAAGTGAGGTACCAAATTTCTCTTGGAACAGCAAGGGGATTGGCTTATCTTCATGAGAAATGCAGGGACTGTATCATACACTGTGATGTGAAGCCAGAGAACATTCTTTTGGATGCAGATTTTTGTCCAAAGGTAGCAGATTTTGGCCTTGCAAAGCTTGTGGGAAGGGACTTCAGCCGGGTACTCACTACCATGAGAGGAACAATAGGCTATCTTGCACCAGAGTGGATCTCTGGTGTGGCTATCACTGCAAAAGCTGATGTATACAGTTATGGTATGATGCTTTTTGAGCTTGTGTCTGGCACGAGAAACTCTGATCCTTCTGAAGATGGCCAAGTTAAGTTCTTTCCCACTTTTGCTGCAAACACAGTGCACCAAGGAGGGAATGTGCTCACACTAGTGGATCCAAGGTTGGAGGGAGAGGCCAGCATTGAAGAGGTTACTAGAGTCATCAAAGTTGCTATATGGTGTGTTCAAGATGATGAAGCTCACAGGCCTTCCATGGGTCAGGTTGTTCAGTTCCTTGAGGGGGTTTTGGATGTGACTTTGCCTCCAATTCCAAGAACACTCCAAGCATTGGTTGACAACCAGGAGCATGTAGTTTTCTTCACTTATTCAGATCCTGCGGTCTCTACCAAGAGTTCACAGCAGGTGAAGAGCAATGTCTCAACACACTCTTCTCATTCCAAAAGAAACAGCTCCTCTAGTACCCAGTCCTGA 2307 0.4391 MWYKKQSRRTYVWVANRDDPVSDKNSAMLTILRGNLVLLENWNLVWSTNLSSPSSGSVEAVLLGNGNLILSNKPNASESESLWQSFDHPTNTWLPGGRIKLDHKTKKPQYLTSWKNYEDPATGQFSLELDPNGTTSYLILWNKTEQYWTSGPWNGNVFSLVPEMNIKYFYNFTFVSNENESYFTYNVYGTSLLSRFVMDFTGQIKELTWLEDSQQWNLFWSQPRRQCEVYAVCGAFASCTETSQPYCNCVTGYDPKSQSDWDLGDYSGGCVKSTKFQCESSNSSNGAKDMFLTMPNMALPEHAELVGAGSVGECESTCFSNCSCKAYAFNSSGCSFWNGDLLNLQQLTQDDSTGQTLFLKLAASEFHDPKSSNGISIGVIFGAVGGGVVAILLALVVIVLLRRKMRRGGARIMMEGSLAAFAYRDLRQATKNFSEKLGEGGFGSVFKGTLSDSSVVAVKKLESISQGEKQFRTEVSTLGTVQHVNLVRLRGFCSEGAKKLLVYDYMPNTSLDSCLFQEKKENSKVMLGWKVRYQISLGTARGLAYLHEKCRDCIIHCDVKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTIGYLAPEWISGVAITAKADVYSYGMMLFELVSGTRNSDPSEDGQVKFFPTFAANTVHQGGNVLTLVDPRLEGEASIEEVTRVIKVAIWCVQDDEAHRPSMGQVVQFLEGVLDVTLPPIPRTLQALVDNQEHVVFFTYSDPAVSTKSSQQVKSNVSTHSSHSKRNSSSSTQS* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1131 768 SMART ntp_6 286 361 IPR003609 -
Lja3g1131 768 ProSitePatterns Protein kinases ATP-binding region signature. 437 460 IPR017441 GO:0005524
Lja3g1131 768 Pfam D-mannose binding lectin 10 115 IPR001480 -
Lja3g1131 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Lja3g1131 768 ProSiteProfiles Bulb-type lectin domain profile. 1 83 IPR001480 -
Lja3g1131 768 PIRSF SRK 1 759 IPR024171 GO:0004674
Lja3g1131 768 Gene3D Phosphorylase Kinase; domain 1 398 505 - -
Lja3g1131 768 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 2 732 - -
Lja3g1131 768 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 154 IPR036426 -
Lja3g1131 768 SMART blect_4 1 89 IPR001480 -
Lja3g1131 768 CDD B_lectin 1 89 IPR001480 -
Lja3g1131 768 Gene3D Transferase(Phosphotransferase) domain 1 506 711 - -
Lja3g1131 768 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 2 732 - -
Lja3g1131 768 SMART serkin_6 431 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1131 768 Pfam PAN-like domain 286 343 IPR003609 -
Lja3g1131 768 ProSiteProfiles PAN/Apple domain profile. 278 362 IPR003609 -
Lja3g1131 768 Pfam S-locus glycoprotein domain 148 257 IPR000858 GO:0048544
Lja3g1131 768 CDD PAN_AP_plant 283 362 - -
Lja3g1131 768 CDD STKc_IRAK 437 706 - -
Lja3g1131 768 ProSiteProfiles Protein kinase domain profile. 431 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1131 768 Pfam Protein kinase domain 434 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1131 768 MobiDBLite consensus disorder prediction 742 768 - -
Lja3g1131 768 Gene3D - 1 87 IPR036426 -
Lja3g1131 768 SUPERFAMILY Protein kinase-like (PK-like) 419 736 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1131 Lja-Chr3 11745558 11747996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1131 416 714 Receptor kinase-like Gene Family AT5G20050 44.231 1.47e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja3g1131 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1131 - - gmx:100782119 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1131 3 11745558 11747996 Lja3g1131 3 11745558 11747996 ECH