Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1130 ATGAACAACATGAATAACAAACCATGTTTCTTCTGGCTTTCTCTTCTAATCTCCTGCTTCTTCCTTCACACCTACACTTCCCTTGCTGCTTTGACCACCATCTCAGCCAATCAATCTCTTTCTGGTGACCAAACTCTTGTCTCCAAAGATGGGAACTTTGAACTGGGTTTCATCAATCCAGGCAACTCCTCTAGATACTACATAGGCATGTGGTACAAAAAGGTGTCAAGAAGAACATATGTTTGGGTAGCCAATAGAGATGACCCTGTTTCTGATAAGAATTCTGCCATCTTAACAATATTGCGTGGTAATTTAGTGCTCTTGGAGAATGGGAATCTAGTTTGGTCAACGAATTTGAGCTCTCCTAGCTCTGGTTATGTAGAAGCTGTGCTTCTTGGTAATGGGAACCTGATATTAAGCAACAAGCCTAATGCATCAGAATCAGAATCTCTGTGGCAGAGTTTTGATCATCCAACAGATACATGGCTTCCAGGTGGTAGAATCAAACTGGACCACAAAACGAAGAAGCCTCAGTATCTGACTTCATGGAAGAACTATGGAGATCCATCAACAGGGCAATTCTCTCTGGAACTGGACCCCAATGGAACCAGTGCATATCTGATTCTATGGAACAAAACTGAGCAGTATTGGACCAGTGGTGCTTGGAATGGACATATTTTCAGTTTGGTTCCGGAAATGAGGCTTAACTACATTTACAATTTCACCTTTGTGTCGAATGAGAACGAGAGTTACTTCACCTACACCGTGTACAATACTTCCCAACTATCTCGTTTCGTGATGGATGTCACGGGGCAGATCAAGCAATTTACTTGGCTGGAAGTTTCTCAGGAATGGAACTTGTTCTGGTCACAGCCAAGGCGCCAATGCGAGGTTTATGCTGTTTGTGGTGCATTTGCGAGCTGCACTGAGACATCCCAGCCATACTGTAATTGTGTAACTGGCTATGACCCAAAGTCACGATCTGATTGGGATCTAGGAGATTACACAGGTGGGTGTGTGAAATCAACGAAGTTTCAATGTGAGTCATCCAATTCCTCTAAGGGGGCAAAAGACAGGTTTTTAACAATGCCAAACATGGCTTTGCCTGAACATGCTGAACTTGTGGGAGCTGGTAGTGTTGGTGAATGTGAGTCAACTTGCTTTAGCTACTGTTCCTGCAAAGCTTATGCTTTTAACAGCAGTGGTTGTTCATTCTGGAATGGGGATCTCTTGAATTTGCAACAGCTTACTCAGGATGATAGTACAGGACAGACTTTGTTTCTCAAACTTGCAGCATCTGAGTTTCATGATTCTAAGAGCAGCAATGGGATAAGCATTGGTGTTATTGTCGGTGCTGTTGGTGGTGGTGTTGTGGCGATTCTTCTAGCTCTTGTTGTAATAGTGGTGCTGAGGCGAAGTAAGAGACAAGGTGGAGCAAGAACTAGGATGGAGGGGTCATTGACTGCATTTGCTTACAGAGATTTGCAACAGGCCACAAAGAATTTCTCAGAAAAACTGGGAGAGGGAGGTTTTGGTTCTGTCTTCAAAGGAACATTGTCTGATTCAAGCGTTGTAGCAGTGAAGAAGCTAGAAAGCATTAGCCAAGGTGAGAAGCAGTTCAGAACAGAAGTGAGCACAATTGGAACAGTTCAACATGTCAACCTTGTCAGGCTTCGTGGGTTCTGTTCTGAAGGTGCTAAGAGGCTGCTGGTTTATGATTACATGCCAAACACTTCCTTGGATTCATGCCTGTTTCAGGAGAAGGAAAACTCCAAGGTGATGTTGGGTTGGAAAGTGAGGTACCAAATTGCTCTTGGAACAGCAAGGGGATTGGCTTATCTTCATGAGAAGTGCAGGGACTGCATCATACACTGTGATGTGAAGCCAGAGAACATCCTCCTGGATGCAGATTTGTGTCCCAAGGTAGCAGATTTTGGCCTTGCCAAGCTTGTAGGAAGAGACTTCAGCAGGGTCCTAACTACCATGAGAGGAACAAGAGGCTATCTTGCACCAGAGTGGATCTCTGGAGTGGCTATCACTGCCAAAGCTGATGTTTACAGCTATGGAATGATGCTTTTTGAGATTGTTTCCGGAAGGAGAAACTCTGATCCTTCTGAAGATGGCCTAGTTAAGTTCTTTCCCACTTTTGCTGCAAACACAGTGCATCAAGGTGGGAATGTGCTTACCCTGGTGGATCCTAGGTTGGAGGCTGATGCTAGTGTTGAGGAGGTTACTAGAGTCATCAAAGTTGCTTCTTGGTGTGTTCAAGATGATGAAGCTCACAGGCCTTCCATGGGTCAGGTTGTTCAGATCCTTGAGGGGGTTTTGGATGTGACTTTGCCTCCAATTCCAAGAGCACTCCAAGCCTTTGTTGATAACCAGGAGCACATAGTTTTCTTCACTGATTCAGCTTCCACGGTCTCCACCAAGAGTTCACAGCAGGTGAAGAGCAACGTCTCAACACAGTCTTCTCATTCCAAAAGCAACAGCTCCTCTAGTACCCAGTCCTGA 2511 0.4472 MNNMNNKPCFFWLSLLISCFFLHTYTSLAALTTISANQSLSGDQTLVSKDGNFELGFINPGNSSRYYIGMWYKKVSRRTYVWVANRDDPVSDKNSAILTILRGNLVLLENGNLVWSTNLSSPSSGYVEAVLLGNGNLILSNKPNASESESLWQSFDHPTDTWLPGGRIKLDHKTKKPQYLTSWKNYGDPSTGQFSLELDPNGTSAYLILWNKTEQYWTSGAWNGHIFSLVPEMRLNYIYNFTFVSNENESYFTYTVYNTSQLSRFVMDVTGQIKQFTWLEVSQEWNLFWSQPRRQCEVYAVCGAFASCTETSQPYCNCVTGYDPKSRSDWDLGDYTGGCVKSTKFQCESSNSSKGAKDRFLTMPNMALPEHAELVGAGSVGECESTCFSYCSCKAYAFNSSGCSFWNGDLLNLQQLTQDDSTGQTLFLKLAASEFHDSKSSNGISIGVIVGAVGGGVVAILLALVVIVVLRRSKRQGGARTRMEGSLTAFAYRDLQQATKNFSEKLGEGGFGSVFKGTLSDSSVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGAKRLLVYDYMPNTSLDSCLFQEKENSKVMLGWKVRYQIALGTARGLAYLHEKCRDCIIHCDVKPENILLDADLCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEIVSGRRNSDPSEDGLVKFFPTFAANTVHQGGNVLTLVDPRLEADASVEEVTRVIKVASWCVQDDEAHRPSMGQVVQILEGVLDVTLPPIPRALQAFVDNQEHIVFFTDSASTVSTKSSQQVKSNVSTQSSHSKSNSSSSTQS* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1130 836 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 9 802 - -
Lja3g1130 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Lja3g1130 836 SMART serkin_6 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1130 836 SMART blect_4 37 158 IPR001480 -
Lja3g1130 836 PIRSF SRK 3 827 IPR024171 GO:0004674
Lja3g1130 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 9 802 - -
Lja3g1130 836 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Lja3g1130 836 Pfam D-mannose binding lectin 79 184 IPR001480 -
Lja3g1130 836 CDD STKc_IRAK 506 774 - -
Lja3g1130 836 Gene3D - 27 156 IPR036426 -
Lja3g1130 836 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lja3g1130 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 223 IPR036426 -
Lja3g1130 836 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Lja3g1130 836 SMART ntp_6 355 430 IPR003609 -
Lja3g1130 836 SUPERFAMILY Protein kinase-like (PK-like) 486 804 IPR011009 -
Lja3g1130 836 MobiDBLite consensus disorder prediction 810 836 - -
Lja3g1130 836 CDD PAN_AP_plant 346 431 - -
Lja3g1130 836 ProSitePatterns Protein kinases ATP-binding region signature. 506 529 IPR017441 GO:0005524
Lja3g1130 836 ProSiteProfiles Bulb-type lectin domain profile. 31 152 IPR001480 -
Lja3g1130 836 Gene3D Transferase(Phosphotransferase) domain 1 575 779 - -
Lja3g1130 836 ProSiteProfiles Protein kinase domain profile. 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1130 836 Gene3D Phosphorylase Kinase; domain 1 466 574 - -
Lja3g1130 836 CDD B_lectin 37 158 IPR001480 -
Lja3g1130 836 Pfam Protein kinase domain 503 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1130 836 Pfam PAN-like domain 355 412 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1130 Lja-Chr3 11745333 11756761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1130 482 782 Receptor kinase-like Gene Family AT5G20050 45.397 1.36e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja3g1130 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1130 - - gmx:100305421 1244.95