Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1126 ATGTTTTTTACACCCTTTACAAACATGATAACTATCTTTCTCTTTCACATGCATTGTTGGTTGCTATGCTTTTCTCAGCTGTGTTTCGCAGGAGACACTTTGAACGTCGGCCAGGAGATAACAGGAAATGGAACTGTTCTTGTTTCAGCTGCAAAAAAGTTTGAACTTGGCTTCTTTTCTCCTGATCTAAATGTTACTGGCGGTAAAGGAAGATACTTAGGGATATGGTATTACCGAGAAGAGGGCTCAGGACTCTCACCAGTGGTGTGGGTTGCCAACAGAGACAACCCCGTAGCTGATGATTCTATTGGTGTTTTCAGAATCGCAGACGATGGGAATCTGGTTGTTTTAGACACATCCGGTATACGCTACTGGTCGGCATCCAACCTTACAAACTCTTCTTCAGCTACAAACAGGAGTGTGAAGCTCATGGATTCTGGGAACCTTGTGTTACTAGATGAACATGTGGGAATGAAACTGTGGGAGAGCTTTGAACACCCAACTGACACGTTCCTACCCGGTATGAAGATGGATAAGACTTTGGAGTTGACTTGCTGGAAAAGCCTTAGCGACCCGGGAAGGGGGAACTTCACTTTCAAGATGGATAAAAAATGGGAGAACCGTTTTGCGATTTTAAACCAAGGACAACTTTACTGGCAGAGTGAAGAACAAGGAGACGGAGTGATGAATCCAGAGTCAAATCCTGATGACATAAGCAATGATGTTTACAACTTATTGACCAATTTCAAGGAGCTTAAAAATAAAACAGTGAGCAGCTACGACAACACGAGGCTGCTCCTCAATTCCACAGGCGTGATAAAAGTTCTTTATAGGGTCAATTTCCAAAGTGATATAGTTTGGTGGTATCAGCCTAGAACAACATGCTTGACATATAATGTTTGCGGGAACTTTTCAAGTTGCAACGACGACAATGATAAGTTATGTACATGTTTGCCTGGATTTGGTCGCAGGTCGCCTCTGAATGATTACACAGTAGGGGGAGATACTTCTTCTCTACTATGTACCAGAAAATCAACATCATGCGGAGCAAACACAAATACGTTCTTAAACTTGACCATGATGAAAATAGGTAGCCCTGATATAAAAGTCTCTGCACAAGACGAAAATGAATGCAAATTTCGTTGCATTTCCATGTGCTCCCAGACTCAGTGCCAGGCTTGTTCATACGTTCCAATACCTGTACAGCAGCGTGGTCTTAATCTCTCCCCTTGTTGGATCTGGACACAGAATTTAACTACTCTTAAAGAAGAGTACCTTGGTGGAGATGATCGCAAACTCTTTGTCCGGGTAGCCAAATCAGACATAGCACCAACTCCAAAGACTTGTGATGCTTGTGGCATAAACATAGTCCCTTATCCGCTGAGTACTGGAGGAAGTTGTGGAGAGAGTTTATACTTCAAATTCAGCTGCAACTACTCAACAGGGCAGCTTAGTTTCTTCACGAGCACCAACTCCAAGCGTTACCAGATCACTCGTGTGGAACCGGATTCGAGGAAATTCTTCATCGAGGTCACTCGGGACAAACGTCACTGTGGTGATTTTAAAAGAGCTCAGAACGATAATCTGGATGTTTCTTTTCCGTTCAACTCGACCGACGACCCCTGCTCTGACCAAGTAGCTATTAGTTGGCAACCACCATCTGAACCCCCCACATGTGCTAATTCAAGTGATTGTAATGGTTGGAAACATTCAACTTGCAAAGGAAATAGATGTCGTTGCAATGCAAATTATTATTGGCATGGAGATCTTTTAAGTTGTACAGAAAAAGAGCCAACAAGAAAAGGAAACCCCAAGAGCACACTGTCTTTGATTCTTGGCATAGCTCTTCCTGGCGTGGTTATTCTGGCTTGCATATGTATTTTAGCTTATGTATGCAGGCGGAAAATAGCACTAAAGCTCAAACAAGAAAGTGAAAGCATACTGAGACAAAGAGGGCGCTTTTATGACAGTGAAAGACATGTGAAAGATTTGATAGACAAGGAGGGATTAGAAGAAAAAGACAATGAAGGCATAGAGGTGCCCTATTTTGATTTTGAGAGCATACTAGTGGCCACGGATTACTTCTCTGATGCAAATAAGCTTGGGAGAGGGGGTTATGGGCCAGTTTACAAGGGTAAGCTTCAAGGTGGTCGAGAAATTGCGGTGAAGAGGCTTTCAAGTGTTTCATCACAAGGCATACAAGAATTCAAGAACGAGGTTGTTTTGATTGCCAAGCTTCAACATCGGAACCTTGTTAGACTCTGGGGCTATTGCATAAAAGGAGACGAAAAAATTTTGATTTATGAATATATGCCTAACAAGAGCTTAGACGCATTTGTATTTGATCCGACGAAAAGTGCACTCTTGGATTGGCAAATGCGATTTGACATACTTCTCGGAATTGCTCGTGGGTTACTTTATCTTCACCAAGACTCTAGACTAAGAGTAATCCACAGAGACTTGAAAACTAGCAACATTCTTTTAGATGGTGAGATGCAACCAAAAATTTCAGACTTTGGATTGGCGAGAATATTTGGAGGCAAAGAGACTGAGGCAAACACTCAGAGGGTAGTGGGGACATATGGATACATGTCTCCTGAATATGCATTGGATGGACAATTCTCAACCAAATCGGATATTTTCAGCTTTGGTGTTGTCTTGCTTGAGATTATCAGTGGGAAAAAAAACACAGGATTTTATCAGTATAAAGGAACTTTAAGCCTTTTGGGTTATGCTTGGAAACTGTGGACAGAGAACAAGTTGCTGGATTTAATGGACTTATCTCTAGGTGAAGCTTACAATGCAAACCAATTTATAAGGTGTACACATGTTGGACTCTTATGTGTACAGGATGAACCTGATGATCGACCAAACATGTCCAATGTTGTAATAATGCTTGACAGTGAAACTGCAACCCTTCCAACCCCTAAACAACCAACCTTTTTTACGCGTAAAGACTTATCTAGCACAGCTTCTTCAAGTTTGCAGTTTGATAGTAGCATTGTAGAAGGTCGATAG 3018 0.4192 MFFTPFTNMITIFLFHMHCWLLCFSQLCFAGDTLNVGQEITGNGTVLVSAAKKFELGFFSPDLNVTGGKGRYLGIWYYREEGSGLSPVVWVANRDNPVADDSIGVFRIADDGNLVVLDTSGIRYWSASNLTNSSSATNRSVKLMDSGNLVLLDEHVGMKLWESFEHPTDTFLPGMKMDKTLELTCWKSLSDPGRGNFTFKMDKKWENRFAILNQGQLYWQSEEQGDGVMNPESNPDDISNDVYNLLTNFKELKNKTVSSYDNTRLLLNSTGVIKVLYRVNFQSDIVWWYQPRTTCLTYNVCGNFSSCNDDNDKLCTCLPGFGRRSPLNDYTVGGDTSSLLCTRKSTSCGANTNTFLNLTMMKIGSPDIKVSAQDENECKFRCISMCSQTQCQACSYVPIPVQQRGLNLSPCWIWTQNLTTLKEEYLGGDDRKLFVRVAKSDIAPTPKTCDACGINIVPYPLSTGGSCGESLYFKFSCNYSTGQLSFFTSTNSKRYQITRVEPDSRKFFIEVTRDKRHCGDFKRAQNDNLDVSFPFNSTDDPCSDQVAISWQPPSEPPTCANSSDCNGWKHSTCKGNRCRCNANYYWHGDLLSCTEKEPTRKGNPKSTLSLILGIALPGVVILACICILAYVCRRKIALKLKQESESILRQRGRFYDSERHVKDLIDKEGLEEKDNEGIEVPYFDFESILVATDYFSDANKLGRGGYGPVYKGKLQGGREIAVKRLSSVSSQGIQEFKNEVVLIAKLQHRNLVRLWGYCIKGDEKILIYEYMPNKSLDAFVFDPTKSALLDWQMRFDILLGIARGLLYLHQDSRLRVIHRDLKTSNILLDGEMQPKISDFGLARIFGGKETEANTQRVVGTYGYMSPEYALDGQFSTKSDIFSFGVVLLEIISGKKNTGFYQYKGTLSLLGYAWKLWTENKLLDLMDLSLGEAYNANQFIRCTHVGLLCVQDEPDDRPNMSNVVIMLDSETATLPTPKQPTFFTRKDLSSTASSSLQFDSSIVEGR* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1126 1005 Gene3D - 26 165 IPR036426 -
Lja3g1126 1005 ProSiteProfiles PAN/Apple domain profile. 348 438 IPR003609 -
Lja3g1126 1005 Gene3D Phosphorylase Kinase; domain 1 659 770 - -
Lja3g1126 1005 SMART blect_4 38 167 IPR001480 -
Lja3g1126 1005 Pfam S-locus glycoprotein domain 258 323 IPR000858 GO:0048544
Lja3g1126 1005 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 188 IPR036426 -
Lja3g1126 1005 ProSiteProfiles Protein kinase domain profile. 695 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1126 1005 CDD B_lectin 39 167 IPR001480 -
Lja3g1126 1005 CDD STKc_IRAK 701 967 - -
Lja3g1126 1005 Gene3D Transferase(Phosphotransferase) domain 1 771 978 - -
Lja3g1126 1005 SUPERFAMILY Protein kinase-like (PK-like) 677 986 IPR011009 -
Lja3g1126 1005 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 25 994 - -
Lja3g1126 1005 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 994 - -
Lja3g1126 1005 SMART serkin_6 695 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1126 1005 ProSiteProfiles Bulb-type lectin domain profile. 31 164 IPR001480 -
Lja3g1126 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Lja3g1126 1005 Pfam Protein kinase domain 696 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1126 1005 Pfam D-mannose binding lectin 88 179 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1126 Lja-Chr3 11713610 11718611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1126 598 984 Receptor kinase-like Gene Family AT4G05200 50.388 3.86e-130 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g1126 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1126 - - lja:Lj3g3v2888270.2 1597.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1126 3 11713610 11718611 Lja3g1126 3 11713610 11718611 ECH