Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1117 ATGGTGCCATCACCCATGGGCGATGGAGGAGTGGCGTGTTTGCCCTTGCAGCAGAAGAAACATGTTAGGGAGAGGTTGTCGAATGCAGCAGTGGAGAATGCGGGGATTAAGAATGGGAGCGGTTTCAGTTCTGAGCTGGTCAAGGGTGCTGGCAAGAAGAAGAAGAAGAAGAAAGTGAAGGTGAAGAGGAAGAAAGTGATACCCGCGGTGAAGAGTGAATTGGCAGTGGACAGAGTGAGCGGCGGCTGGGGCAGCAATGATGTTGCGAGTGGCGGAATAAATGGGCAGAAAGAAGAAGTGGAGGAGGGTGAATTGGGGACTTTGAAATGGCCGGGGAGTGAGGTGGAGAATGGGGAGTTTGTGCCTGAGAAGCCGTGGCCGCTGTTAAAAAGTGAAATTCAGAATCGGGAGATTGTCAGTGAGAGGTGGAAGGAAGGGCAGGTGGAGAAGGGAGAGTTTGTTTCTGAAAAATGGAGAAAGGATGACGTGGAGAATGGGGAGATAGTTGGTGAGAATGGTAGGAAAGGAGGAGCTGAGAAAGGGGAATATGGATGGTGGAGAGATGGTACAAAGGATGGAGTTGAGAAGGGAGAGTTCATTCCAGATAGGTGGCATAGGAGGGACACGGGGAGGGATGATCATGGTTACGCGAGAATCCACAGGCATCAGTCAGGTAGGGACAAAGGATGGAAAAGTGAACGTGAACGTGAACTTACACCGCCTTCAGGGAGATATACAGGTGATGAGTCTTTTAGGAAGAGGGAACTGCATGCAAGTTCAAGTCAGTATGCTAAAAGTGCTCCCAGGTGGGAGAATGGGGGAGAAAGAAATATAAGGATTGGTTCAAAAATTGTGGATGAGGAGAAAAATGAGTACAGCAATGGCAGGACTGATTCACGAGGTTACTCTTCTGGTAGTCGGTTGAAAAGGCATGGTAATGAATCAGATAGCTATGAGCGGAAGCAAAATGGAGATTATGATGGCTTAAAAAGTCGAAGGCTTTCCAATGATGGCTCACGCGATGGTTATCCGGAGCACCATTCTCGACTGTCTGTGGATAGATCTTATAGAAATAGTTCTTCAAGATTATCAATGGACAAGTATTCTTCCAGGCATCATGAATCTTCTTTGCCAACCAGATCAGCTTATGATAAGCATGGATGCAGCCATGGTCAATCGGAGCGGTCCCCTCGTGATCGAACCAGGTATTACGATCATAAAGATCGCATGCAAGTGCGTCAATCACACTATGACCATGAGAAATCTCCATATAGCCGTGAGAAATCTCCACGTGTTCGTGAAAGATCTCCACGTGTTCGTGAAAGATCTCCACGTGTTCGTGAAAGATCCTCGTGCGATAAGAATCGGGATAGAAGTCGTCACCATGATCATAAATTGAGAAGTCCTACTCATGCTAAGGGTTCCCCACAAGATCGAGTTCTACACCATGATCACAGGGACCGAACTCCAAATTCAATGGAGCGATCCCCACTTGATCGGATTAGACAAATTATTCATCAAGAAACAAGTAGTAAAACCTTATCAAGTGAAAACAATAACTCACAATATAGCTGTAAGAATCATGAAGACAAGAACATCCAAAAGGAGTCAAATCTTTCAGATATAGAATCTCAAGGTAAAAGAAATGTGCATGAGGCCTACAGGTCTATTAAGAAAGGTGTCTGCAATGAACCTGAAAAGGAACAACAGTCCTGCAGCCCCACTGTAAGCTACAAGGGCTCTCCTAGCTTGCAGCCATCTCCTGAGGAGCTGTCTTCTATGGAAGAAGATATGGACATATGTAATACCCCACCACATGTTCCTGTTGTGGCAGATTCATCATCTGGGAAATGGTTTTACCTTGACTATGGCGGTGCAGAACATGGACCTTCTACATTATCTGAAATAAAGGTCCTTGTTGATGATGGTGTACTAATGTCAGATCATTTTATTAAGCACATGGATAGTAACCGATGGTTAACTGTTGAAAATGCAGCATCACCATTGGCAGCTCAGAATTATCCGACGATTCTGTCTGACACTGTAACCCAGCTGGTAAACCCTCCAGAAGCTCCTGGTAATCTTTTGACAGATACTGGAGATATTTTTCAATGTGATCCCGAGAAATATCAGGAAATGCCAGCTCCTTTGCTGCAGGCAACGATATGCCCTGATGACGAACTGTTGGAGGACCTCCACATTGATGAAAGGGTTGGAGTTCTGTTAGAGGGTTATGATGTCATTCCTGGAAGGGAGCTTGAGGCAATTAAAGGAGCTTTGCAAATGAATTTTGATTATACAAAAGGGGAGGGATTGGAAGACTACGAAGGTTTTCCTTGTTATGATACTTGCTTGAGCATGGAACTTGATTCAAGAATTGATTTTGCCTCAAGAGACTATGAGTCTCAGCTAAGTACGCCTCCAGACAACGATAATGGATTTACCCTCAGTGTCCCTGATGACTTGTTTTCATCTCGATGGTCTTGCAAAGGTGGTGACTGGAAGAGGAGTGATGATGCCCAAGATAGATGTAGTAAGAAGAAACTTGTCCTAAATGATGGGTTTCCATTATGCCAAATGCCCAAGTCTGGGTGTGAAGATCCACGTTGGCCTCGGAAAGATGACTTGTATTATCCTTCTCACAGCAGGATGCTTGATCTTCATCCTTGGGCTTTTTGCACTGATGAGAGGGTTGATTGCAGCAGTGCTGTAAGCAAACCAGTTCAAGGTAAGCTTACTTTTGTAAGAGGAGTAAAAGGAAATGTTCTTTCAGTGGTCAGGATAAATGAACGAGTAATCAAGGATCAGGGATCATTGGACTGTGAGCCACGCCAAAAGAGCCGTGGCAATGATAGATATCATTCAAGGTCAACTTGGCCTTTGTCTTCAGCCAGTGATAGCAAGCGATCATCAACTGAAGAAGATTATCAGTCAAAAGCTGTTAATGATCAAGGTTCTCAAAGCTCCTGCAGGAGCATTGAATTTATTACTACTGGTAAAGACCATCTTTGTAATGTCCATGCCTTACAGTTAAGTTTGGGTGACTGGTACTATCTTGATGGTTTGGGGCACGAAAGAGGGCCTTCATCATTTTCAGAGCTACAGTGTTTAGTAGACCAAGGAATTATAAAAAAGTATAGCAGTGTGTTCAGAAAATTTGATAAAATCTGGGTTCCTGTTACCTCTACCAGAGAAACCTATGATGTCAGTTTCATGAGCCACCAAGAAAGCAGTTCAGCGTCTGGTGAATGCTCTGGACATCAATCATTGCAAACACAAGGTGTTTCATTTGGTGAACCTCAATCAAAGTCAAGTTTGTTTAACAGATTACACCCTCAGTTTGTTGGTTATACTCGTGGGAAACTACATGAGTTAGTAATGAAATCATATAAGAGCCGGGAATTTGCTGCAGTTATAAATGAGGTTTTAGATCCGTGGATCAATGCAAGACAAACAAAGAAAGAAATTGAGAAACAAATACATTGGAACTCAGAAGGTGATGCATTTGCTTCCAAAAGAGCAAGGTTGCTGGTAGATGATCATGCCAGTGAAGAAGATGTTGTAGATGCTGAGACAGATGAGTTCACATTTGAGGATCTATGTGGTGATGCTGCTTTCTCAAGCGAAGTAAGTGGCAATACCGTTTCTGAGGTTGGAAGCTGGGGATTATTGGATGGTCATCTATTGGCACGAGTCTTACACTTTCTGAGGTCTGATTTGAAGTCCCTTGTCTTTGTATCAATGACTTGCAAGAATTGGAGAGAGTCTGTAAGATTTTACAAAGAAGTCTCAAGAAGCATTGATTTGTCATCCCTTGGCTATTCCTGCACTGATTCCATAGTGTGGAACATTGTGAATGCTTATGAGAAAGACAAGATCAAATCTATGATTCTGACGGGGTGCACCAATATCACTGCTGGAATGCTGGAGAAAATTCTTCTTTCATTTCCTGGTTTATCTACAGTATACATTAGAGGGTGCAGCCAGTTTGAAGAGCTGACTCCTAAATTTACCAAAGTGAAATGGATTCAGAGCCGAAGTTCTTGTATAAGACAAATTGCAGAAGAGCCACATGAAATCAGTAGCCTTAAACAGATTACTGTTCTCAAAACTAGTAGTTTAGGTATTAGGGATGATTTTGGTGAGCTGAAGAATTATCTTGATAGTGTTGATAAGAGGGACATGAAGCAATTATTCCGTCGAAACTTATACAAGAGGTCCAAATTATATGATGCTAGAAAGTCCTCTTCCATTCTATCTAGGGATGCTCGCACAAGACGATGGTCAATTAAGAAGTCTGATTGTGGTTACAAGAGGATGGAGGAATTTCTTGCTTCAAGACTGAGGGAAATTATGAAGGCCAATTCCTGTGACTTTTTTGTGTCCAAGGTTGCTGAAATTGAGGCTAAAATGAAAACCGGTTATTACAGTGGGTATGGTTTGAGCTCTGTCAAGGAGGACATCAGTAGAATGTGCCGCGATGCAATAAAAGCAAAGAATCGGGGTAATGCTAGTGATATGAATCACATTATCACATTATTTATTCAGCTTGCAGCACGATTGGAGGAGAGCTCTAAATATGTGGGTGGCAGAGATGCACTGTTCAAGTTATGGAAAAAGGACTCACCATCAGCATTATGTTCTAATTCTTCTAAGTACAAGAAGAATAGATTGGTAACTGAGAGGAAGTATGGGAGTAATGGCACACTTGGTGATTTGGCTAATGGAGAATATGCTTCTGATAGAGAAATTAGGAGGCGTTTATCAAAATTGAATAAGAAATCCATGGACTCAGAGAGTGAGACATCTGATGACCTTTATATATCTTCTGAAGATGATGGTGGTACTACAACCTCCGATGCTGAAAGTGACCAACAAACCCATTCAGAAAGTCAAATTGGGGAGTCCAGAGGAGATGGATGCTTCACTCCTGATGATAAGTTGGATTTCATATCTGATGAGCGGGAATGGGGAGCTCGCATGACAAAAGCTAGTCTGGTTCCTCCTGTAACTCGGAAATATGATGCCATTGATCAATATATCGTTGTAGCTGATGAAGAGGATGTGCGAAGGAAGATGCAGGTTTCATTACCGGATGACTATGCAGAGAAGTTGAGTGCGCAAAAGAATGGTGTTGAGGCGTCTGATATGGAACTGCCTGAAGTGAAAGATTACAAACCTAGAAAACAGCTTGGAAATGAAGTCATTGAGCAAGAAGTTTATGGAATTGATCCCTATACACACAATCTCTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTACAAGAGAAGCATTTATTTATAGAAGACATGCTCCTTCGGACATTGAATGAGCAAGTTAGGCATTTTACTGGAACTGGAAGCACCCCAATGAGCTACACTTTGAAGCCTGTTGTTGAAGAAATTGAAAGATATGCAAAGGAGCACTGTGATGCTAGAATGGTGAAAATGTGCCAAGGTATCTTAAAAGGCATAGACCGTCGTCCCGATGACAAATATGTAGCTTATAGAAAGGGACTTGGTGTTGTTTGCAACAAGGAAGAAGGGTTTAATGAAGATGATTTTATTGTAGAGTTTCTGGGAGAGGTATATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAAAAAAATAGCAAAGATCCAGCACCAGAGTTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGATATGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCAGTTGATGGTCATTATCAAATCGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAAGAGATCACTTTTGATTACAATTCTGTTACCGAGAGCAAAGAGGAATATGAAGCATCAGTTTGCTTGTGTGGAAGCCAAGTTTGCCGTGGGAGCTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTACTGAAGGAGTGGCATGGAATTCTTGATCGTCATTATATGATGCTAGAAGCTTGTGAATTGAACTGTGTTTCTGAAGAGGACTATAATGATCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTAGTTGCTTATGCAGCTCGCGTTGTGAGATTTGTCAATTTTGAAAGAACAAAACTTCCTGAGGAAATTCTAAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCAGAGATATGTCATGAAGTTGAGAGGAGTGATGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCAGTCACCCTAGAAAAGGTAAGGTATGTTATGAGATGTATCTTTGGCGATCCAAGGAAAGCTCCACCTCCTCTTGAGAGGCTCAATCCTGAAGCAGTTGTTTCCTTCCTCTGGAAAGGAGAGGATTCATTTGTTGGGGAGCTGCTTCAGTGTATGGCTCCTCATGTGGAAGAGTCTACCTTTAATGATCTCAAGTCCCAAGTTTGTGCCCGTGATCCTTCAAGTTCTGGAGATGTTCAAAAAGAACTTCAGAAATCTCTGTTGTGGTTAAGGGATGAGGTTCGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTACGCTTTTACCAAGTACTTTCTTAGAATACAGGATTATCAAACTTTTACTTCGTCACCTGTCTATATTAGTCCACTTGACTTAGGTCCTAAGTATGCTGACAAATTGGGAGCAGAATTTCAGGAGTATCAGAAGATATATGGTGAAAATTATTGTCTAGGGCAGCTGATTTTTTGGTATAATCAGAGTTATTTGGAGCCAGATTGTATCCTGGCTAGAACCAGGAGGGGTTGCATATCTTTACCAGACATCAGTTCCTTCTATGCCAAGGCTCAGAAGCCTTCACCACATCGTGTTTATGGTCCAAGGACAGTGAGATCCATGCTGACAAGAATGGTGAAGCAGCCTCAAAGACCTTGGCCCAAAGACCAGATATGGTCATTCAAAAATTCTCCGAAATTCTTTGGTAGCCCAATGTTAGACGCTGTAATTAATAACTCTCCACTGAACAAGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAGGCCAAGTGGGATCAGTGA 7185 0.4246 MVPSPMGDGGVACLPLQQKKHVRERLSNAAVENAGIKNGSGFSSELVKGAGKKKKKKKVKVKRKKVIPAVKSELAVDRVSGGWGSNDVASGGINGQKEEVEEGELGTLKWPGSEVENGEFVPEKPWPLLKSEIQNREIVSERWKEGQVEKGEFVSEKWRKDDVENGEIVGENGRKGGAEKGEYGWWRDGTKDGVEKGEFIPDRWHRRDTGRDDHGYARIHRHQSGRDKGWKSERERELTPPSGRYTGDESFRKRELHASSSQYAKSAPRWENGGERNIRIGSKIVDEEKNEYSNGRTDSRGYSSGSRLKRHGNESDSYERKQNGDYDGLKSRRLSNDGSRDGYPEHHSRLSVDRSYRNSSSRLSMDKYSSRHHESSLPTRSAYDKHGCSHGQSERSPRDRTRYYDHKDRMQVRQSHYDHEKSPYSREKSPRVRERSPRVRERSPRVRERSSCDKNRDRSRHHDHKLRSPTHAKGSPQDRVLHHDHRDRTPNSMERSPLDRIRQIIHQETSSKTLSSENNNSQYSCKNHEDKNIQKESNLSDIESQGKRNVHEAYRSIKKGVCNEPEKEQQSCSPTVSYKGSPSLQPSPEELSSMEEDMDICNTPPHVPVVADSSSGKWFYLDYGGAEHGPSTLSEIKVLVDDGVLMSDHFIKHMDSNRWLTVENAASPLAAQNYPTILSDTVTQLVNPPEAPGNLLTDTGDIFQCDPEKYQEMPAPLLQATICPDDELLEDLHIDERVGVLLEGYDVIPGRELEAIKGALQMNFDYTKGEGLEDYEGFPCYDTCLSMELDSRIDFASRDYESQLSTPPDNDNGFTLSVPDDLFSSRWSCKGGDWKRSDDAQDRCSKKKLVLNDGFPLCQMPKSGCEDPRWPRKDDLYYPSHSRMLDLHPWAFCTDERVDCSSAVSKPVQGKLTFVRGVKGNVLSVVRINERVIKDQGSLDCEPRQKSRGNDRYHSRSTWPLSSASDSKRSSTEEDYQSKAVNDQGSQSSCRSIEFITTGKDHLCNVHALQLSLGDWYYLDGLGHERGPSSFSELQCLVDQGIIKKYSSVFRKFDKIWVPVTSTRETYDVSFMSHQESSSASGECSGHQSLQTQGVSFGEPQSKSSLFNRLHPQFVGYTRGKLHELVMKSYKSREFAAVINEVLDPWINARQTKKEIEKQIHWNSEGDAFASKRARLLVDDHASEEDVVDAETDEFTFEDLCGDAAFSSEVSGNTVSEVGSWGLLDGHLLARVLHFLRSDLKSLVFVSMTCKNWRESVRFYKEVSRSIDLSSLGYSCTDSIVWNIVNAYEKDKIKSMILTGCTNITAGMLEKILLSFPGLSTVYIRGCSQFEELTPKFTKVKWIQSRSSCIRQIAEEPHEISSLKQITVLKTSSLGIRDDFGELKNYLDSVDKRDMKQLFRRNLYKRSKLYDARKSSSILSRDARTRRWSIKKSDCGYKRMEEFLASRLREIMKANSCDFFVSKVAEIEAKMKTGYYSGYGLSSVKEDISRMCRDAIKAKNRGNASDMNHIITLFIQLAARLEESSKYVGGRDALFKLWKKDSPSALCSNSSKYKKNRLVTERKYGSNGTLGDLANGEYASDREIRRRLSKLNKKSMDSESETSDDLYISSEDDGGTTTSDAESDQQTHSESQIGESRGDGCFTPDDKLDFISDEREWGARMTKASLVPPVTRKYDAIDQYIVVADEEDVRRKMQVSLPDDYAEKLSAQKNGVEASDMELPEVKDYKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDMLLRTLNEQVRHFTGTGSTPMSYTLKPVVEEIERYAKEHCDARMVKMCQGILKGIDRRPDDKYVAYRKGLGVVCNKEEGFNEDDFIVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDRHYMMLEACELNCVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARVVRFVNFERTKLPEEILKHNLEEKRKYFSEICHEVERSDAEVQAEGVYNQRLQNLAVTLEKVRYVMRCIFGDPRKAPPPLERLNPEAVVSFLWKGEDSFVGELLQCMAPHVEESTFNDLKSQVCARDPSSSGDVQKELQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAFTKYFLRIQDYQTFTSSPVYISPLDLGPKYADKLGAEFQEYQKIYGENYCLGQLIFWYNQSYLEPDCILARTRRGCISLPDISSFYAKAQKPSPHRVYGPRTVRSMLTRMVKQPQRPWPKDQIWSFKNSPKFFGSPMLDAVINNSPLNKEMVHWLKHRPAIFQAKWDQ* 2395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1117 2394 MobiDBLite consensus disorder prediction 85 119 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 164 259 - -
Lja3g1117 2394 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1975 2394 IPR045606 -
Lja3g1117 2394 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 6 2394 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 164 525 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 1609 1636 - -
Lja3g1117 2394 SMART set_7 1830 1970 IPR001214 GO:0005515
Lja3g1117 2394 MobiDBLite consensus disorder prediction 34 59 - -
Lja3g1117 2394 ProSiteProfiles SET domain profile. 1825 1964 IPR001214 GO:0005515
Lja3g1117 2394 MobiDBLite consensus disorder prediction 387 459 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 566 590 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 507 525 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 303 353 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 940 983 - -
Lja3g1117 2394 SUPERFAMILY SET domain 1839 1987 IPR046341 -
Lja3g1117 2394 Pfam SET domain 1909 1964 IPR001214 GO:0005515
Lja3g1117 2394 Coils Coil 525 545 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 280 295 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 366 380 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 1590 1645 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 561 592 - -
Lja3g1117 2394 CDD SET_SETD2-like 1838 1986 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 1079 1100 - -
Lja3g1117 2394 MobiDBLite consensus disorder prediction 469 506 - -
Lja3g1117 2394 Gene3D SET domain 1809 1995 IPR046341 -
Lja3g1117 2394 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 6 2394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1117 Lja-Chr3 11657345 11673372 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lja3g1117 SET 3.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1117 K22748 - gmx:100815409 3650.52