Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1104 ATGGGAGGCCAGAGTTACTTCAGGGCTCTGATTATTTTCCTTGTAGCATTAATTGGATCAAGCCATGCTCAATTGCAACAAGGTTTCTATGCTAGAAGATGCCCTAAAGCTGAGCAAATCGTTCTGAAGTATGTTCATGAGCATATCCCCCATGTCCCATCACTAGCAGCTGCACTCATAAGACTGCATTTCCATGACTGTTTTGTCAGGGGCTGTGATGCATCAGTGCTTTTGAACTCAACAAAAACCAATCTAGCTGAAAAGGACGCTCTCCCAAATCTTACAGTCAGAGGCTTTGGATTCATTGACACAATAAAGAGCATTCTTGAAGCAGAATGTCCTGGGGTAGTCTCTTGTGCTGATATAGTAGCTTTGACTGCCAGAGACTCTGTTCATGCAATTGGTGGACCTTATTGGAATGTTCCAACAGGAAGAAGGGATGGGTTGATTTCTAACGCACCTGATGCTCGTGCCCTTCCTGCTCCATTTCACAACCTTACCACCCTCATAACAATATTTGCCAATGTGGGACTTGATGTAAATGATTTGGTCTTGCTTTCTGGTGCTCACACAATTGGTATTTCCCATTGCTCAACAATTTCAACTAGGTTGTACAATTTTACTGGAAAGGGTGGACAAGACCCAGATCTAGACAGTGAATATGCAACAAATCTCAAAACCTTTAAGTGTAAGAACATCAATGATCAAAAGACACTTATTGAGATGGACCCTGGAAGTCGCAATACATTTGATCTTGGTTACTACAAACAAGTCCTGAAGAGACGGGGTTTGTTCGAATCAGATGCTGCATTGCTGAATAGCTCTGTTACAAGGTCTATTATCACTCAACAACTCCGGTCAACTCAGAAATTTTTTCTTGGATTTGCCAAGTCCATGGAGAAAATGGGCAGAATTAATGTCTTGACTGGGACTAAAGGAGAGATCAGGAAGCATTGTGCACTAGTAAATAACTGA 975 0.4195 MGGQSYFRALIIFLVALIGSSHAQLQQGFYARRCPKAEQIVLKYVHEHIPHVPSLAAALIRLHFHDCFVRGCDASVLLNSTKTNLAEKDALPNLTVRGFGFIDTIKSILEAECPGVVSCADIVALTARDSVHAIGGPYWNVPTGRRDGLISNAPDARALPAPFHNLTTLITIFANVGLDVNDLVLLSGAHTIGISHCSTISTRLYNFTGKGGQDPDLDSEYATNLKTFKCKNINDQKTLIEMDPGSRNTFDLGYYKQVLKRRGLFESDAALLNSSVTRSIITQQLRSTQKFFLGFAKSMEKMGRINVLTGTKGEIRKHCALVNN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1104 324 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 Pfam Peroxidase 47 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Lja3g1104 324 Gene3D - 28 323 - -
Lja3g1104 324 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Lja3g1104 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lja3g1104 324 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja3g1104 324 PANTHER PEROXIDASE 3 323 - -
Lja3g1104 324 Gene3D Peroxidase, domain 2 160 302 - -
Lja3g1104 324 PANTHER PEROXIDASE 25-RELATED 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1104 Lja-Chr3 11495109 11498064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1104 13 324 Peroxidase AT1G05260 65.605 7.07e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1104 K00430 - gmx:100785662 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1104 3 11495109 11498064 Lja3g1104 3 11495109 11498064 ECH
Lja3g3477 3 68415566 68417581 Lja3g1104 3 11495109 11498064 PCT