Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1103 ATGGGAGGCCAGACTTACTTCAAGGCTTTGATATTTATTTGTCTGATAGCATTAATTGGATCAAGTACTCATGCTCAATTGCAGCAAGGTTTCTATGCTAGAAGCTGCCCAAATGCTGAAAAAATCGTTTTGAAGTATGTTCGTCAAAACATTCCTCGTGTCCCATCACTTGCAGCTGCTCTCATAAGACTCCATTTCCATGACTGTTTTGTCAGGGGCTGTGATGCATCAGTGCTTGTGAGCTCAACAAAAACCAATCAGGCTGAAAGGGACTCTATCCCAAATCTTTCACTCAGAGGCTTTGATTTCATTGACAAAATAAAGAGCCTTGTTGAAGCTGAATGTGCTGGGGTAGTCTCTTGTGCTGATATATTATCTTTGACTGCTAGAGACTCTGTTCAGGCCATTGGTGGACCTTATTGGAAAGTTCCAACAGGAAGAAGGGATGGGTTGATTTCTAACGCACCTGATGCTCGTGGCCTTCCTGCTCCATTTCACAACCTTACCACCCTCATAACAATATTTGCCAATGTGGGACTTGATGTAAATGATTTGGTCTTGCTTTCTGGTGCTCACACAATTGGTATTTCCCATTGCTCAACAATTTCAAATAGGTTGTACAATTTTACTGGGAAGGGTGATCAAGACCCAGATCTAGATAGTGAATATGCAAAAAACCTCAAGACCTTAAAGTGCAAGAGTATCAATGACCAAACGACACTTATGGAGATGGACCCCGGAAGTCGCGACAAATTTGATCTTGGCTATTACAATCAAGTCATTAAGAGAAGGGGTTTGTTCGAATCAGATGCTGCATTGTTGAAAAGCTCTGTTACAAGGTCTATTATCACTCAACAACTTCAGTCAACTCAGAAATTCTTTGCTGAATTTGCCAAGTCCATGGAGAAAATGGGCAGAATTAATGTCTTGACTGGGACTCAAGGAGAGATCAGGAAGCATTGTGCACGAGTAAATAACTAA 981 0.4139 MGGQTYFKALIFICLIALIGSSTHAQLQQGFYARSCPNAEKIVLKYVRQNIPRVPSLAAALIRLHFHDCFVRGCDASVLVSSTKTNQAERDSIPNLSLRGFDFIDKIKSLVEAECAGVVSCADILSLTARDSVQAIGGPYWKVPTGRRDGLISNAPDARGLPAPFHNLTTLITIFANVGLDVNDLVLLSGAHTIGISHCSTISNRLYNFTGKGDQDPDLDSEYAKNLKTLKCKSINDQTTLMEMDPGSRDKFDLGYYNQVIKRRGLFESDAALLKSSVTRSIITQQLQSTQKFFAEFAKSMEKMGRINVLTGTQGEIRKHCARVNN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1103 326 CDD secretory_peroxidase 26 324 IPR033905 GO:0004601|GO:0042744
Lja3g1103 326 Gene3D - 30 325 - -
Lja3g1103 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Lja3g1103 326 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Lja3g1103 326 Gene3D Peroxidase, domain 2 162 304 - -
Lja3g1103 326 PANTHER PEROXIDASE 25-RELATED 5 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g1103 326 PANTHER PEROXIDASE 5 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1103 Lja-Chr3 11481965 11484251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1103 9 325 Peroxidase AT4G11290 62.187 4.53e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1103 K00430 - gmx:100785662 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1103 3 11481965 11484251 Lja3g1103 3 11481965 11484251 ECH