Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1101 ATGTCTGAATTCGACACAAACATCCCAACTGCTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCTGGGGCTAAAGAGTATGTTCATGTCCGTGTCCAGCAGCGAAACGGAAGGAAAAGCTTGACAACTGTTCAAGGATTAAAGAAGGAGTACAGCTACAACAAGATACTCAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCCAGGACCCTGAGCTGGGACAGGTCATACAACTTCAGGGAGATCAAAGAAAGAATGTTTCTACTTTCCTTGTGCAGGCAGGCATAGTGAAGAAGGAGCATATCAAGATTCATGGTTTCTAA 342 0.4444 MSEFDTNIPTAFDPFAEANAEDSGAGAKEYVHVRVQQRNGRKSLTTVQGLKKEYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1101 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Lja3g1101 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Lja3g1101 113 SUPERFAMILY eIF1-like 7 113 IPR036877 GO:0003743|GO:0006413
Lja3g1101 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Lja3g1101 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Lja3g1101 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Lja3g1101 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Lja3g1101 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Lja3g1101 113 Gene3D - 2 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1101 Lja-Chr3 11461681 11462679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1101 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 89.381 5.21e-75 216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1101 3 11461681 11462679 Lja3g1101 3 11461681 11462679 ECH