Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1065 ATGGGTTTCATTACTCTCCTCTCACAGTCAATGGAGCCATACACAATCTATGCCACACTGATCTTTCTCTTTTGCCTTCTTTTTTGGTTACTGAAGAGAAGCAATGCTGACATACCCACAAAGGCACCACCACCACCGGAAGCTGAGGGTGCATGGCCTTTGATCGGCCACCTCCACCTCTTAGGTGGGTCTCACGCAGCTCATGTCACCTTGGGTAACATGGCCGACAAATACGGACCCATTTTCACCTTGCGTTTAGGTATTCATCGAACTTTGGTAGTGAGCAATTGGGAAATGGCAAAAGAGTGTTTCACTGTTAATGACAAAGTGTTTGCTTCCCGTCCCAACTCTTTAGCCTTTGAAGTTTTGGGCTCCAACTTCTCATTTTTTGGTAGCAGCCCCTACGGTCCCAATTGGCGCTACATGCGCAAGATAGCCACAGTGGAGGTCCTCTCTACCAAACGCATAGAAATGCTCAAGCAAGTGATGGACTCGGAGGTGAAGGCAGCGATGAAAAAGAGCTATGATTTTTGGGTAATGATGAAGGAGAGTGGACCTAAAAAAGCGGTCACTGAAATGGAGAAATGGTTTGCAAACATAACACTGAACGTTATGTTCAGAGCGGTGTTAGGAAAGCGGTTAACTGGGATGGGTTGTGAAGATGACGAGGAAGAGAACGAAAAGATTCAGAAAGCAGTTAGAGACTTCTTCCATCTCTTTGGGCAGTTTACTGTTTCTGATGCGGTCCCGTTTTTGAGATGGTTGGATTTGGATGGACAGGAGAAGAAAATGAAGAAGACAGCCAAAGAATTGGATGACTTCGCTCAGGTTTGGCTTGAGCAACACAAATACAAGACGAACAGTGGTTCAGAGGAATGGAAAAATGGTGAACATGATTTCATGGACTTGCTTCTTTCCGCTGTTGATGATGAGTGTCTACACGGTCATGATCATGATACCATAGTAAAATCTACATGTCTGCAATTAATTTTAGCTGGCACAGACACTATGACAGGGACATTGACTTGGGCTCTCTCCTTACTTCTCAACAACCGTGAAGTCCTAAATAAGGCTACACATGAGTTAGACACACAAATTGGTAGGGAAAATGTGGTAGTGGAATCAGACTTCGAGAAGTTGGAGTATCTACAAGCCATCGTCAAGGAAACATTGCGCTTATACCCACCAGGACCACTAAGTGTGCCTCACGAGTCCATGGAAGATTGTATTGTAGGTGGATACCATGTGCCTGCTCACATGCGTCTCTTGACTAATATTTCAAAACTTCAACAAGATCCCTCACTATATTCTGATCCATTGGAGTTTCGCCCGGAGAGATTCCTCACAACCCATAAGGACATTGATCTTAAGGGAAAACATTTTGAGTTCATCCCATTTGGTGCAGGTAGAAGAATATGTCCTGGAATCTCTTTCGCTCTTCAGCTAATGCAAATGACACTTGCTGCTCTATTGCATGGATTTGAAATAGTAACTATTGATGGAGGACCTGTGGATATGGTTGAAAAAACTGGGTTAACCAACGTTAAAGCCTCTCCACTCCAAGTCATTCTTACACCACGTCAATCTATACAAGTTTACAATCAAAATTAA 1611 0.4376 MGFITLLSQSMEPYTIYATLIFLFCLLFWLLKRSNADIPTKAPPPPEAEGAWPLIGHLHLLGGSHAAHVTLGNMADKYGPIFTLRLGIHRTLVVSNWEMAKECFTVNDKVFASRPNSLAFEVLGSNFSFFGSSPYGPNWRYMRKIATVEVLSTKRIEMLKQVMDSEVKAAMKKSYDFWVMMKESGPKKAVTEMEKWFANITLNVMFRAVLGKRLTGMGCEDDEEENEKIQKAVRDFFHLFGQFTVSDAVPFLRWLDLDGQEKKMKKTAKELDDFAQVWLEQHKYKTNSGSEEWKNGEHDFMDLLLSAVDDECLHGHDHDTIVKSTCLQLILAGTDTMTGTLTWALSLLLNNREVLNKATHELDTQIGRENVVVESDFEKLEYLQAIVKETLRLYPPGPLSVPHESMEDCIVGGYHVPAHMRLLTNISKLQQDPSLYSDPLEFRPERFLTTHKDIDLKGKHFEFIPFGAGRRICPGISFALQLMQMTLAALLHGFEIVTIDGGPVDMVEKTGLTNVKASPLQVILTPRQSIQVYNQN* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1065 536 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 Pfam Cytochrome P450 47 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Lja3g1065 536 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 PANTHER CYTOCHROME P450 82C3-RELATED 45 533 - -
Lja3g1065 536 PANTHER CYTOCHROME P450 45 533 - -
Lja3g1065 536 Gene3D Cytochrome P450 39 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1065 536 SUPERFAMILY Cytochrome P450 46 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1065 Lja-Chr3 11063674 11066615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1065 20 527 Cytochrome P450 AT4G31940 49.419 2.12e-171 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1065 - - gmx:100778017 675.241