Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g1040 | ATGTTTGGCAGAGCGCCGCCGAAGAAGAGTGACAGCACCAGGTACTACGACATCTTGGGTGTCTCCAAGACCGCTTCTCAAGATGATTTGAAGAAAGCTTACAAGAAAGCCGCCATTAAGAATCACCCTGATAAGGGTGGTGATCCTGAAAAGTTCAAGGAGTTGGCACAAGCTTATGAGGTTCTGAATGACCCTGAGAAGCGCGAGATATATGATAATTATGGTGAAGATGCACTTAAGGAAGGAATGGGTGGTGGAGGAGGTGGGGGTCATGACCCGTTTGACATATTCTCATCTTTCTTTGGTGGGAGTCCCTTTTCATCAGGTGGTGGTGGTAGTCGAGGGCGGAGGCAGAGACGTGGAGAAGATGTTGTTTACCCTCTTAAGGTCTCTCTGGAGGACCTTTACCTCGGGGCAGCTAAGAAGCTTTCCCTCTCGAGAAATGTCTTATGCTCCAAGTGCAATGGCAAAGGTTCCAAGTCCGGGGCCTCCCTGAAGTGTCCTGGTTGTCAAGGATCTGGCATGAAGGTTTCTATAAGACACATAGGTCCATCAATGATTCAGCAAATGCAGCATCCTTGCAATGAATGTAAGGGTACTGGAGAAACTATAAATGATAGGGACCGCTGCCCACAGTGCAAGGGTGATAAGGTTTCCCAAGAGAAGAAAGTACTTGAAGTTTTCGTGGAGAAGGGAATGCAGAACCAGCAGAAGATTACATTCCCTGGTGAAGCTGATGAAGCACCAGATACAACTACTGGGGATATCGTGTTTGTGCTTCAATTGAAGGAACACCCCAAATTCAAAAGAAAGGCTGAAGACCTCTTTGTGGAGCACACCCTGTCCCTCACTGAGGCTTTATGTGGCTTCCAATTTGTGCTCACTCACTTGGATGGTCGGCAGCTCCTGATCAAATCAAACCCTGGGGAAGTTGTAAAGCCTGATTCATTTAAGGCCATCAATGATGAGGGAATGCCGATGTACCAGAGGCCATTTATGAAGGGGAAGCTTTACATTCACTTCACTGTGGAATTCCCTGATTCTCTAAATCCTAATCAGGTTAAGGATTTGGAGGCTGCTCTGCCAGCTAAACCTTCATCACAATTGACTGACATGGAGCTTGACGAGTGTGAGGAGACTACACTCCATGATGTCAATATGGAAGAGGAGAATAGGAGGAAAGAGCAGCAAGCTCAGCAGGAGGCATATGATGAGGATGATGATATGCCTGGTGGTGCACAGAGGGTACAATGCGCCCAGCAGTGA | 1266 | 0.4747 | MFGRAPPKKSDSTRYYDILGVSKTASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLNDPEKREIYDNYGEDALKEGMGGGGGGGHDPFDIFSSFFGGSPFSSGGGGSRGRRQRRGEDVVYPLKVSLEDLYLGAAKKLSLSRNVLCSKCNGKGSKSGASLKCPGCQGSGMKVSIRHIGPSMIQQMQHPCNECKGTGETINDRDRCPQCKGDKVSQEKKVLEVFVEKGMQNQQKITFPGEADEAPDTTTGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAINDEGMPMYQRPFMKGKLYIHFTVEFPDSLNPNQVKDLEAALPAKPSSQLTDMELDECEETTLHDVNMEEENRRKEQQAQQEAYDEDDDMPGGAQRVQCAQQ* | 422 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g1040 | 421 | PRINTS | DnaJ domain signature | 16 | 34 | IPR001623 | - | |
Lja3g1040 | 421 | PRINTS | DnaJ domain signature | 47 | 67 | IPR001623 | - | |
Lja3g1040 | 421 | PRINTS | DnaJ domain signature | 67 | 86 | IPR001623 | - | |
Lja3g1040 | 421 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 117 | 275 | IPR008971 | GO:0006457|GO:0051082 | |
Lja3g1040 | 421 | ProSiteProfiles | dnaJ domain profile. | 14 | 75 | IPR001623 | - | |
Lja3g1040 | 421 | Coils | Coil | 386 | 406 | - | - | |
Lja3g1040 | 421 | Pfam | DnaJ central domain | 151 | 217 | IPR001305 | GO:0031072|GO:0051082 | |
Lja3g1040 | 421 | PANTHER | CHAPERONE PROTEIN DNAJ 2-RELATED | 7 | 421 | - | - | |
Lja3g1040 | 421 | MobiDBLite | consensus disorder prediction | 380 | 400 | - | - | |
Lja3g1040 | 421 | SMART | dnaj_3 | 13 | 67 | IPR001623 | - | |
Lja3g1040 | 421 | ProSiteProfiles | Zinc finger CR-type profile. | 138 | 222 | IPR001305 | GO:0031072|GO:0051082 | |
Lja3g1040 | 421 | ProSitePatterns | Nt-dnaJ domain signature. | 52 | 71 | IPR018253 | - | |
Lja3g1040 | 421 | CDD | DnaJ_zf | 151 | 217 | IPR001305 | GO:0031072|GO:0051082 | |
Lja3g1040 | 421 | Pfam | DnaJ domain | 15 | 72 | IPR001623 | - | |
Lja3g1040 | 421 | Pfam | DnaJ C terminal domain | 125 | 346 | IPR002939 | - | |
Lja3g1040 | 421 | Gene3D | - | 113 | 265 | - | - | |
Lja3g1040 | 421 | Gene3D | - | 266 | 347 | - | - | |
Lja3g1040 | 421 | SUPERFAMILY | Chaperone J-domain | 10 | 112 | IPR036869 | - | |
Lja3g1040 | 421 | CDD | DnaJ | 15 | 64 | IPR001623 | - | |
Lja3g1040 | 421 | MobiDBLite | consensus disorder prediction | 380 | 421 | - | - | |
Lja3g1040 | 421 | CDD | DnaJ_C | 122 | 349 | - | - | |
Lja3g1040 | 421 | Gene3D | - | 151 | 217 | - | - | |
Lja3g1040 | 421 | Gene3D | DnaJ domain | 11 | 112 | IPR036869 | - | |
Lja3g1040 | 421 | PANTHER | DNAJ-LIKE-2, ISOFORM A-RELATED | 7 | 421 | IPR044713 | GO:0006457|GO:0030544 | |
Lja3g1040 | 421 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 268 | 355 | IPR008971 | GO:0006457|GO:0051082 | |
Lja3g1040 | 421 | Hamap | Chaperone protein DnaJ [dnaJ]. | 11 | 372 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Lja3g1040 | 421 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 148 | 219 | IPR036410 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g1040 | Lja-Chr3 | 10798702 | 10801411 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g1040 | 5 | 74 | C2H2 Transcription Factor Family | AT1G74250 | 37.975 | 2.96e-10 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja3g1040 | K09503 | - | gmx:547558 | 736.873 |