Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1037 ATGGACGTTGATTCCTCGATGTCACCGGAGACCGATCACGTTGACGCGGCGGCGGTGCTCAACCATGCCGAGAAAGAGCAGCAGCAGATAGGGGACCCGCAGCCGCCATCCCCGACTTCCGATGCCGGATCTCCGGTTCTGCCGCCGGGGCCGCCTGCCGCGGCTCTGGGGCAGCAAGGTTCTGTTGTTGGCCCGAGGCTTGCGCCGACTTACACCGTGGTGGATGCGATTATAGAGAAGAAGGATGACGGGCCCGGGCCGCGGTGTGGACACACGTTGACGGCGGTGGCGGCTGTTGGAGAGGAAGGCACGCCGGGGTACATTGGTCCGAGGCTGATTTTGTTCGGCGGTGCCACGGCGCTTGAAGGGAATTCTGGGGCTTCCGGGACTCCTTCATCTGCTGGAAATGCAGGCATCCGCTTAGCTGGTGCCACAGCTGACGTCCACTGTTATGATGTCTTGACCAATAAATGGTCTAGGATAACTCCCTATGGAGAGCCTCCATCCCCAAGGGCTGCACACGTCGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCGGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACACAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCAGGCCCTGGACCTGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATCGGAGGCAATGATGGAAAGAGACCTTTGGCGGATGTTTGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGCCCGCCTCCTTGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAGTAGTGTTCCATTGGCAAGTGCATATGGGCTTGCTAAGCATAGAGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCTCCATCTCCAAGATATCAACACGCAGCGGTCTTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGACGAACAGTAGAAGACTCATCAAGCGTTGCAGTGTTGGACACTGCTGCTGGTGTCTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACAGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAGCTGACACGGCGTTGTAGGCATGCGGCTGCTGCTGTTGGTGATCTAATTTTTATTTATGGAGGTTTACGTGGTGGGATCTTGCTGGATGACCTTCTTGTTGCGGAAGATCTTGCTGCTGCTGAAACTACTAGTGCTGCTTCACATGCTGCTGCAGCAGCAGCTGCATCTAATGTACAAGTGGGGCGAGTGCCTGGCCAATATGGCTTTGTTGATGATAGGACAAGGCCAACAATGCCTGAAGTAACTGCTGATGGTGCAGTTATTTTGGGAAATCCAGTTGCTCCTCCTGTAAATGGCGACATGTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGAACTAGGAGGACTAGCAAAGGCGTTGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGACAAGTGAATGGAGAAGTTGAATTGCCTGACCGAGACCGTGGGGCTGAGGCTACACCTAGTGGGAAACAAACACCTTCTTTCATTAAGCCCGATTCTGCAGGGTCAAATAGCATTGCTCCTGGTGGAGTTAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTGGGTGGCATGGTTAGGCAGCTTTCCATTGATCAGTTTGAAAATGAAGGCAGGAGGGTCAGTTATGGGACACCGGAAAATGCAACGGCTGCTAGAAAATTATTAGATCGGCAGATGTCTATCAACAGTGTCCCAAAGAAGGTCATAGCACACCTCTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTCTTGGATTGCAATGAAATTGCGGATCTTTGTGATAGTGCAGAGAGGATATTTTCAAGTGAACCAACCGTCATACAGCTTAGGGCACCGATTAAAATATTTGGTGATTTACACGGTCAGTTTGGGGATCTCATGCGCCTCTTTGATGAGTATGGTGCCCCATCAACGGCTGGGGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATAGGGGGCAACACAGCTTGGAAACTATAAGCCTTCTGCTTTCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATCAACGCCCTTTTTGGTTTTCGAATTGAGTGCATCGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCACCGGATAAATCGTCTGTTTAATTGGCTTCCTCTGGCGGCTCTAATTGAGAAAAAAATTATTTGCATGCATGGTGGTATTGGCCGTTCAATAAATCATGTTGAACAAATTGAGAATATTCAGCGTCCAATTACGATGGAAGCTGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGGCTACGGCCAAATGCTAGAGGTCCGGGGTTAGTTACATTTGGGCCTGATCGAGTCATGGAATTTTGCAACAACAATGATCTTCAGTTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGATTTGCCCAGGGACATTTGATCACCCTTTTCTCAGCTACAAATTACTGTGGTACCGCAAATAATGCTGGGGCGATATTAGTTTTGGGTAGAGATCTTGTCGTGGTTCCTAAACTGATTCATCCACTACCACCTGCAATTTCTTCACCTGAAACGTCTCCAGAACGTCATATTGAGGATACGTGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAACAAATGATCGAGGTTCGCTTGCTTGGATATAA 3009 0.5015 MDVDSSMSPETDHVDAAAVLNHAEKEQQQIGDPQPPSPTSDAGSPVLPPGPPAAALGQQGSVVGPRLAPTYTVVDAIIEKKDDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSGASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPSPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRTVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGILLDDLLVAEDLAAAETTSAASHAAAAAAASNVQVGRVPGQYGFVDDRTRPTMPEVTADGAVILGNPVAPPVNGDMYTDISTENAMLQGTRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQTPSFIKPDSAGSNSIAPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLSLKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGSLAWI* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1037 1002 Pfam Kelch motif 329 375 IPR011498 GO:0005515
Lja3g1037 1002 MobiDBLite consensus disorder prediction 978 1002 - -
Lja3g1037 1002 PIRSF STPPP_BSU1 35 1002 IPR012391 GO:0004721|GO:0009742
Lja3g1037 1002 SMART pp2a_7 671 955 IPR006186 GO:0016787
Lja3g1037 1002 Gene3D - 266 460 IPR015915 GO:0005515
Lja3g1037 1002 PRINTS Serine/threonine phosphatase family signature 699 726 IPR006186 GO:0016787
Lja3g1037 1002 PRINTS Serine/threonine phosphatase family signature 895 915 IPR006186 GO:0016787
Lja3g1037 1002 PRINTS Serine/threonine phosphatase family signature 734 761 IPR006186 GO:0016787
Lja3g1037 1002 PRINTS Serine/threonine phosphatase family signature 917 933 IPR006186 GO:0016787
Lja3g1037 1002 PRINTS Serine/threonine phosphatase family signature 805 831 IPR006186 GO:0016787
Lja3g1037 1002 PRINTS Serine/threonine phosphatase family signature 835 862 IPR006186 GO:0016787
Lja3g1037 1002 PRINTS Serine/threonine phosphatase family signature 767 791 IPR006186 GO:0016787
Lja3g1037 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1002 - -
Lja3g1037 1002 ProSitePatterns Serine/threonine specific protein phosphatases signature. 768 773 IPR006186 GO:0016787
Lja3g1037 1002 SUPERFAMILY Kelch motif 143 432 IPR015915 GO:0005515
Lja3g1037 1002 MobiDBLite consensus disorder prediction 547 584 - -
Lja3g1037 1002 SUPERFAMILY Metallo-dependent phosphatases 656 962 IPR029052 -
Lja3g1037 1002 CDD MPP_Bsu1_C 651 953 IPR041758 -
Lja3g1037 1002 Gene3D - 67 265 IPR015915 GO:0005515
Lja3g1037 1002 Pfam Galactose oxidase, central domain 223 276 - -
Lja3g1037 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1002 - -
Lja3g1037 1002 MobiDBLite consensus disorder prediction 978 993 - -
Lja3g1037 1002 MobiDBLite consensus disorder prediction 38 52 - -
Lja3g1037 1002 MobiDBLite consensus disorder prediction 563 577 - -
Lja3g1037 1002 MobiDBLite consensus disorder prediction 1 61 - -
Lja3g1037 1002 Pfam Calcineurin-like phosphoesterase 699 906 IPR004843 GO:0016787
Lja3g1037 1002 Gene3D - 635 974 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1037 Lja-Chr3 10732237 10743486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1037 663 898 Calmodulin-binding Proteins AT5G63870 29.412 3.06e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1037 - - gmx:100816091 1753.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1037 3 10732237 10743486 Lja3g1037 3 10732237 10743486 ECH
Lja3g3531 3 70016120 70031848 Lja3g1037 3 10732237 10743486 PCT