Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1029 ATGGGGTTCTTGTTGAAAGAAGCTTTGAAGACTCTGTGTGCTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGGTGTAATAATTCCAACAGGCTGTTAATCTGGGAAGATTGCTACTATGAACCTTTGTCATCTCCTTTCCCTCAACGTATTGTTGGAACTTCTAATTTGCCATACCAAGATGGGGAAGGATGCTGGTTTTCTTCCGAGTCTCAGCTGCGGAATCAGGAGGAGGACAGAGTCTGTTCATTGGTTAATAGAATGATGGTGAATAATTCAGTCAATATCACTGGTGAAGGGATACTTGGACGGGCAGCGTTTACAGGAAATCATCAGTGGATTCTTTTTAACAATTTCACTAGTGATGCATATCCACCAGATGTATGTACAGAGTTGCATCACCAATTTTCAGCTGGAATGCAGACGGTAGCGGTTATTCCTGTGCTTCCCCATGGGGTTGTCCAACTTGGATCTATCTTGCCTATTATGGAAAATATGAGATTTGTGAATGATGTCAAGAGCTTGATCCTGCAACTGGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATTCGCCAAAACTTTCTAATGAAAGGCTTAATGGACCTGTGACTGATTGTGTGCCTGTGTCTGTTGATCCCCCAGTCATGACCTCAAACTGTACACCCTCAGTAGCTAATTATTCCAATCAACTAAGTAATTCATCTCATGCCCCTAGGCCTGTTGCTCAACCACCTCATCTTCATAGGGTAGACATTAATAATCAGCAGGGTTCTGTAATGTCACCTCAAACCCATAACCTAAACCAGATTTTTGGTATTGACAGCCTCTGCCAGCCGAAGGCTCATTCAATTATTAAAGCAAGTGTCAGTGGCCAACATCAGAATACAGTTCTGAAGGCTGAAGCTCGAGTGTTACCGGCAAATCTTGATTCACATCTGCAACAGCATTCTGTTTCATATAATGCGAGATCTGCATTCAATGGATTAGCTGGTTCTCATCAATCTAGTCTGAATGGCTGCAACCCTAAATATATGGAACAACAAATTTTATCAGGGGTTGGGAGACTAAGTCATGTTAATCCTAATAATAATCCATCAAGTTCCTTTCATATGTCCCAACTGAAAACCGGGGGAGGCCAAATTCTTTATCAAGGTCAAGGTTCTGGGAGCACTTCACTACTTGGAGGAGTCCCAATATGTAGTGGAGCGAGTAGTCTTTTTAGGACAAATATGATAAATTGCTCGGCTTCAAACCCCTCTGAATTATCTGCTGCTGGTTTTTCTGGAAAACAAAAAGTTGGGTTTGGGATTCAAAATGATGATTTAACTAAATCTGGGATTTCTCTGCCTAACATGACTAGTCAATCACCTGCAAATCACATGCACCTAGAAGGCTCTGATCAGAAGAATCTTCCCACTGAATTAAAGCATGCTCATGATGCTGTGGCTTCCACATATCAAAGGGTAGATGATGATTTGCTGCAAGCCCTTAAGATCCCGTCTCTCCATCTTGAGGAGCATGTTCCTATGAGTGATAGCTTCCCTGATTTTCTTTATGATTGCCTCAATAAGGATGTTACTACTAGTCAACATATGGAAATGAATGCTAAACATGACGAATATGGTACTCAACTTCCATCAGGTGATGATCTCTTTGATGTTTTTGGTGTGGATCTCAAAAGGAAACTGCTGAATGGAAACTGGAATAGATCACATGCCCATGAGTCAGATGCCAATGCCAAAAATCTTGATAAAAAGGCTCCATGTGTGGATTTTCCGGGTACAGGTCCTGATAATAGTTATTCCGGTAATGAAGCAATATCAGACAGTGGCATCTTCTGTGGAACAGGCACTGACCACCTTCTAGATGCTGTTGTCTCAAGGGCTCAATCTGCTGCCAAACAAAACTCTGATGAAACGTCTTGCAAGACAACATTTACAAGGATTAGTACCGCCACCTCTGTCCCCTCTCCATCCTGCAAGCAGGTTATGTCTGATCATGTTGCCCAGGGAGCATTGTTTGATTTTCCTAAGATGGGGACTAAAACAGGTGCTGTGGAAGCAAGTTCTCTTCGGTCAGGGTGTAGCAAGGGTGATGCTGGAAACTGTTCTCAAAGTACTTCCATATATGGGTCTCAACTTAGTTCATGGGTTGACGACAGCAGCAATGTGAAGCGTGAAAATAGTGCTTCAACTGGATACTCTAAGAGGCCGGATGAAGCAGGCAAAACAAATCGTAAACGGCTTAAACCAGGAGAGAACCCCAGGCCTCGACCTAAAGATCGTCAAATGATTCAAGATCGTGTGAAAGAGTTGAGGGAAATTGTGCCTAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAACGGACCATCAAGCATATGCTTTTCTTGCAGAGTGTTACGAAGCATGCTGACAAGTTGAAACAGACAGGGGAATCTAAGATTGTGAGTAAAGAAGGTGGATTGCTCTTAAAAGATAACTTTGAGGGAGGGGCTACTTGGGCATATGAGGTTGGCTCACAATCAATGGTGTGCCCTATCATAGTTGAGGATCTTAATCCTCCTCGCCAGATGCTAGTGGAGATGCTCTGCGAGGAACGAGGTTTCTTTCTGGAAATAGCTGACTTAATAAGAGGATTAGGTTTAACAATCTTGAAGGGGGTCATGGAAGCCCGCAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTGACAAGGATGGAAATATTCATGTCACTAGTTCAACTTGTGGAACAAACAGTGAAGGGTGGTGCATCTTCATCTAATGCAGTTGACAACAACATGATGGTTTATCATTCTTTCCCGCAAGCCACCTAG 2862 0.4312 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSNRLLIWEDCYYEPLSSPFPQRIVGTSNLPYQDGEGCWFSSESQLRNQEEDRVCSLVNRMMVNNSVNITGEGILGRAAFTGNHQWILFNNFTSDAYPPDVCTELHHQFSAGMQTVAVIPVLPHGVVQLGSILPIMENMRFVNDVKSLILQLGCVPGALLSEDYSPKLSNERLNGPVTDCVPVSVDPPVMTSNCTPSVANYSNQLSNSSHAPRPVAQPPHLHRVDINNQQGSVMSPQTHNLNQIFGIDSLCQPKAHSIIKASVSGQHQNTVLKAEARVLPANLDSHLQQHSVSYNARSAFNGLAGSHQSSLNGCNPKYMEQQILSGVGRLSHVNPNNNPSSSFHMSQLKTGGGQILYQGQGSGSTSLLGGVPICSGASSLFRTNMINCSASNPSELSAAGFSGKQKVGFGIQNDDLTKSGISLPNMTSQSPANHMHLEGSDQKNLPTELKHAHDAVASTYQRVDDDLLQALKIPSLHLEEHVPMSDSFPDFLYDCLNKDVTTSQHMEMNAKHDEYGTQLPSGDDLFDVFGVDLKRKLLNGNWNRSHAHESDANAKNLDKKAPCVDFPGTGPDNSYSGNEAISDSGIFCGTGTDHLLDAVVSRAQSAAKQNSDETSCKTTFTRISTATSVPSPSCKQVMSDHVAQGALFDFPKMGTKTGAVEASSLRSGCSKGDAGNCSQSTSIYGSQLSSWVDDSSNVKRENSASTGYSKRPDEAGKTNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVQLVEQTVKGGASSSNAVDNNMMVYHSFPQAT* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1029 953 MobiDBLite consensus disorder prediction 723 767 - -
Lja3g1029 953 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 952 IPR043561 GO:0003700|GO:0006355
Lja3g1029 953 CDD bHLH_AtLHW_like 756 825 - -
Lja3g1029 953 MobiDBLite consensus disorder prediction 723 738 - -
Lja3g1029 953 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
Lja3g1029 953 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 952 - -
Lja3g1029 953 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 752 801 IPR011598 GO:0046983
Lja3g1029 953 MobiDBLite consensus disorder prediction 742 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1029 Lja-Chr3 10588378 10595985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1029 552 940 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.731 7.71e-120 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1029 - - lja:Lj3g3v1262250.1 1472.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1029 3 10588378 10595985 Lja3g1029 3 10588378 10595985 ECH
Lja3g3537 3 70235492 70242357 Lja3g1029 3 10588378 10595985 PCT