Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0985 ATGGCAGAGCCTGATGATCTGCCCAAGACTATCGTGCGCCGCGTGGTGAAGGATAAGCTCTCCCGTTGCTCCGAAGACGGTGACATCTCCATCCACAAAGACGCTCTTCTCGCATTCTCTGAAAGCGCCAAAATCTTCATCCACTACATTTCCGCAACGGCTAATGACATATGTAAGGAGTCAAGGAGGCAGATTATCAATGCTGAGGATGTTTTCAAAGCTCTTGAAGAAACCGAGTTCGCTGAGTTTATTCGCCCTCTAAGAGCTTCTCTTGAAGAGTTTAGGAAGAAGAATGCTGGGAAGAAAGCTGCAGCGTCAAAGTACAAAGAAAGTGAGGCAAAAAAGAAAAGGAAGTTGGAAGGCGAGTCATCCAATAAAGGTGAGGCATCTGGTAAAGGTGAGGCTGAGGATGAGGCATCCGATAAGGGCGATGCTGAGGACGAGGTATCCGATAAAGGCGATTCTGAGGACGAGGCATCCGATAAAGGTGAGGCTGAGGACGAGGCATCCGATAAGGGCGAGGCTGAGGACAGCGAAATAAATGAAAGGGATGAAGGCTGTAGTAGTGATGATTGA 576 0.4844 MAEPDDLPKTIVRRVVKDKLSRCSEDGDISIHKDALLAFSESAKIFIHYISATANDICKESRRQIINAEDVFKALEETEFAEFIRPLRASLEEFRKKNAGKKAAASKYKESEAKKKRKLEGESSNKGEASGKGEAEDEASDKGDAEDEVSDKGDSEDEASDKGEAEDEASDKGEAEDSEINERDEGCSSDD* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0985 191 Gene3D Histone, subunit A 2 189 IPR009072 GO:0046982
Lja3g0985 191 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 7 75 IPR003958 -
Lja3g0985 191 MobiDBLite consensus disorder prediction 170 191 - -
Lja3g0985 191 Coils Coil 58 78 - -
Lja3g0985 191 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 167 - -
Lja3g0985 191 MobiDBLite consensus disorder prediction 95 169 - -
Lja3g0985 191 MobiDBLite consensus disorder prediction 95 191 - -
Lja3g0985 191 SUPERFAMILY Histone-fold 7 128 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0985 7 130 CCAAT-HAP3 Transcription Factor Family AT2G37060 29.839 1.33e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lja3g0985 CBFD_NFYB_HMF 3e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0985 K02326 - gmx:100306382 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0985 3 10103199 10105665 Lja3g0985 3 10103199 10105665 ECH