Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0965 ATGGGGTCTGCCAAAATTTTAAGTTTCACCCTTCTCCTGTTTGTTGGATATACTTTGGTCCATGGATCCACCCCAAAGCATTATATAGTTTACATGGGAGATCGTTCACACCCCAATTCAGAATCTGTAGTCAGAGCAAACCATGAGATACTAGCTTCAGTCACTGGAAGTCTCAATGATGCAAAGGCAGCAGCAATCCACCATTACAGTAGAAGCTTTCAAGGCTTCTCTGCCATGATTACCCCAGAGCAAGCTAAAAAACTAGCAGATCATAACTCAGTTGTGTCAGTTTTTGAGAGCAAAATGAATAAGCTCCACACAACACATTCTTGGGATTTTCTTGGATTAGACACTGTCTACAAGAACAACCCTTCAGCTCTGGACTCTGCATCCAATGTTATTGTTGGTGTAATTGACTCTGGGGTGTGGCCAGAATCAGAAAGCTTCAATGATTATGGATTAGGTCCTGTGCCTGAGAAATTCAAAGGAGAATGTGTAACTGGTGATAATTTCACACTTGCCAATTGCAACAAGAAAATCATTGGTGCCCGGTTCTATTCAAAAGGGCTTGAAGCAGAAATTGGTCCTCTAGAAAACATTGTCGACAGCATTTTCTTCAGGTCGCCTCGAGATAGCGATGGACATGGAACACACACTGCTTCCACAATTGCAGGATCCATTGTTTCCAATGTCAGCTTATTTGGCATGGCCAAAGGAACTGCAAGAGGTGGTGCTCCAAGTGCAAGACTTTCCATCTACAAGGCCTGTTGGTTTGGATTTTGCAGTGACGCTGATGTTTTCGCTGCAATGGATGATGCCATTCATGATGGAGTTGACATACTATCTCTTTCCCTTGGCCCTGATCCTCCTCAGCCACTTTACTTCGAGAACGCGATCAGTGTTGGAGCATTCCATGCATTCCAAAAGGGAATTCTTGTTTCTGCTTCTGCTGGAAACTCGGTTTTCCCACGAACTGCGTGCAATGTTGCTCCTTGGATCTTCACTGTTGCTGCTAGCACAGTAGACAGGGAATTCAGATCAGATATCTACCTTGGAAATTCAAAAGTTTTGAAGGGTCTTTCTCTGAATCCAATAAAAATGGAAGGTTCTTATGGTTTGATATATGGAAGTGCCGCTGCAGCCGCTGGAGATGCAGCACTAAATGCAAGCTTCTGCAAGGAACATACTCTAGATCCTACCTTAATCAAGGGTAAAATTGTGATCTGCACAGTTGAAAAATTCACTGATAACAGACGAGAGAAGGCCATAATAATAAAGCAAGGTGGGGGTGTTGGAATGATTCTTATTGATCACAATGCCAGAGATGTTGGTTTTCAATTTGTCATCCCAAGCACTATGATTGGTCAGGATGCTGTAGAAGAGCTTCAAGCATATATGAAGACTGAGAAGAATCCCACTGCTACAATCTTCCCAACATTAACTCTTGTTGGTACCAAACCTGCACCAGAATCCGCAGCTTTCTCTTCCGTGGGACCAAATATAATTACACCGGATATTATTAAGCCTGATATCACAGGACCAGGAGTGAATATTTTGGCAGCATGGTCTCCAGTGGCAACTGAAGCCACAGTTGAACAAAAATCTGTCAACTATAACATCATTTCAGGAACATCAATGTCTTGCCCACATATATCTGCAATTTCAGCAATTATAAAATCTCACCACCCCTCCTGGAGTCCTGCAGCCATAATGTCTGCAATAATGACATCAGCAACAGTTATGGATAACACACACAGCCTCATAGGAAGAGATCCAAATGGAACTCAAGCCACACCATTTGACTATGGATCTGGACATGTTAACCCAGTTGCATCGCTAAATCCTGGATTAGTATATGATTTTAGTTCCCAAGATGTTCTCAATTTTCTCTGCAGCAATGGGGCAAGCCCGGCACAACTTAAAAACCTCACAGGGGAACTCACTCAATGTCAGAAATCTCCTACAGCTTCCTACAACTTCAACTATCCTTCAATTGGTGTGTCCAACTTGAATGGAAGTTTATCTGTTTATCGCACAGTTACTTACTATGGTCAGGAACCAACAGAGTATTTTGCAAGTGTTGAAAGACCATCTGGTGTGATTGTTAGAGTTACACCAGCAAAACTGAAGTTCTGGAAAGCTGGAGAGAAGATAACTTTCAGGATTGATTTCACCCCTTTCAAGAATAGCAATGGAAACTTTGTGTTTGGTGCCTTGACTTGGAACAATGGTAAACAAAGGGTTAGAAGTCCTATTGGTCTCAATGTACTATCTACTTAA 2280 0.4228 MGSAKILSFTLLLFVGYTLVHGSTPKHYIVYMGDRSHPNSESVVRANHEILASVTGSLNDAKAAAIHHYSRSFQGFSAMITPEQAKKLADHNSVVSVFESKMNKLHTTHSWDFLGLDTVYKNNPSALDSASNVIVGVIDSGVWPESESFNDYGLGPVPEKFKGECVTGDNFTLANCNKKIIGARFYSKGLEAEIGPLENIVDSIFFRSPRDSDGHGTHTASTIAGSIVSNVSLFGMAKGTARGGAPSARLSIYKACWFGFCSDADVFAAMDDAIHDGVDILSLSLGPDPPQPLYFENAISVGAFHAFQKGILVSASAGNSVFPRTACNVAPWIFTVAASTVDREFRSDIYLGNSKVLKGLSLNPIKMEGSYGLIYGSAAAAAGDAALNASFCKEHTLDPTLIKGKIVICTVEKFTDNRREKAIIIKQGGGVGMILIDHNARDVGFQFVIPSTMIGQDAVEELQAYMKTEKNPTATIFPTLTLVGTKPAPESAAFSSVGPNIITPDIIKPDITGPGVNILAAWSPVATEATVEQKSVNYNIISGTSMSCPHISAISAIIKSHHPSWSPAAIMSAIMTSATVMDNTHSLIGRDPNGTQATPFDYGSGHVNPVASLNPGLVYDFSSQDVLNFLCSNGASPAQLKNLTGELTQCQKSPTASYNFNYPSIGVSNLNGSLSVYRTVTYYGQEPTEYFASVERPSGVIVRVTPAKLKFWKAGEKITFRIDFTPFKNSNGNFVFGALTWNNGKQRVRSPIGLNVLST* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0965 759 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Lja3g0965 759 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Lja3g0965 759 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Lja3g0965 759 Pfam Fibronectin type-III domain 659 752 IPR041469 -
Lja3g0965 759 Pfam Subtilase family 131 586 IPR000209 GO:0006508|GO:0008236
Lja3g0965 759 Gene3D - 342 483 - -
Lja3g0965 759 CDD PA_subtilisin_like 348 476 - -
Lja3g0965 759 Gene3D - 630 756 - -
Lja3g0965 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 754 IPR045051 -
Lja3g0965 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 106 IPR037045 -
Lja3g0965 759 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 18 754 - -
Lja3g0965 759 SUPERFAMILY Subtilisin-like 105 617 IPR036852 GO:0004252|GO:0006508
Lja3g0965 759 Pfam Peptidase inhibitor I9 27 105 IPR010259 -
Lja3g0965 759 CDD Peptidases_S8_3 104 579 IPR034197 -
Lja3g0965 759 ProSiteProfiles Serine proteases, subtilase domain profile. 110 613 - -
Lja3g0965 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Lja3g0965 759 Gene3D Peptidase S8/S53 domain 132 625 IPR036852 GO:0004252|GO:0006508
Lja3g0965 759 Pfam PA domain 386 462 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0965 Lja-Chr3 9957976 9963042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0965 28 752 Subtilisin-like Serine Gene Family AT2G04160 44.016 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0965 - - gmx:100792672 1283.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0965 3 9957976 9963042 Lja3g0965 3 9957976 9963042 ECH