Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0959 ATGTCAAGCTCTGTAGATTCTCTGCAATCCATGTCTGCTGCAACATGCAGTTTCTTGTTCTTCTCCTTCACTCTTTTGTTCTCTCTGTTCTCCTTCCTCATCTTCATCTCTAGGATGAAACCATGGTGCAACTGCGATCTCTGCAAGAGCTACCTAACCATGAGCTGGACCAGCAAATTCTTCAACTTCTGCGACTGGTACACCCACCTCCTCCGCACCTCACCCACCGGAACCATCCACGTCCACGTCCTGAAAAACACCATCACTTCCAACCCAGAAAATGTTGAGCACATACTGAAAACCAATTTCCAGAACTACCCGAAAGGGAAACCGTTCTCCACCATCCTCGGCGATTTACTCGGTCGTGGAATCTTCAACGTAGACGGAGAGTCGTGGAAGTTCCAGCGCAAGATGGCGAGCATGGAGCTTGGCAGCGTCGCGATCCGCTCCTACGCGATGGAGCTAGTCAACGAGGAGATCCAAACAAGGCTGACCCCTCTCATGGCAGCAACAGCCGCATCAGCAAACAATGTCCTCGACCTGCAGGACATTCTTAGAAGATTCTCATTCGACAACATCTGCAAATTCTCCTTCGGGCTAGACCCATGCTGTCTCCTGCCATCATTCCCTGTCTCGGAACTCGCCGAAGCTTTCGACCTAGCCTCGACGCTTTCCGCACAGAGAGCGATGGCAGCGTCGAGTTTCGTCTGGAAGGCGAAACGTTTCTTCAATTTAGGGAATGAGAAGAAACTCAAAGAAGCTGTAGGAGTAGTAAACCATTTCGCGCAGAAGATGATAAACGAGAAGAGAGAAATGGGGGTGGGAACGAGGAAGGATCTTCTCTCGTGTTTCATGGGGACTGTAAACGACGACGTTTACCTGAGGGACATTGTTGTGAGTTTCTTACTGGCCGGTCGGGACACGGTGGCTGCCGGTTTGACCGGGTTTTTTGCTCTTCTGTCGAAGAATCCAGAAGTGGAGGCGCTGGTTCGGGAGGAGGTGGACCGGATTGTGGGCCCTGGTGACGGCGTTTCGCCGAGCTTTGAGCAGACAAGGGGGATGCATTACTTGAACGCGGCGGTTCATGAGAGCATGCGGCTTTTTCCGCCGGTTCAGTTTGACTCAAAATACGCCACGGAGGATGACGTGTTGCCAGATGGCACTTTTGTGAGGAAAGGGAGTCGGGTCACTTATCACCCGTATGCGATGGGTCGGATGGAGCGGATATGGGGCCCCGATTGTCTCGAGTTTAAACCGGAAAGGTGGTTGAAGGATGGCGTGTTTGTACCGAAATGCCCCTTTAAGTACCCGGTTTTTCAGGCTGGGGTGAGGGTTTGTTTGGGGAAGGATTTGGCCTTGGTGGAAATGAAGTGTGTCGCCGCCGCGTTGGTCCGGCGGTTTGACATTCGGGTTGTTGGGCCGGATCAGGAGCTCCGATTCGCGCCGGGTCTAACTGCTACTTTTAGGGGTGGTTTGCCTGTTAAGGTTTATGAAAGATAA 1500 0.522 MSSSVDSLQSMSAATCSFLFFSFTLLFSLFSFLIFISRMKPWCNCDLCKSYLTMSWTSKFFNFCDWYTHLLRTSPTGTIHVHVLKNTITSNPENVEHILKTNFQNYPKGKPFSTILGDLLGRGIFNVDGESWKFQRKMASMELGSVAIRSYAMELVNEEIQTRLTPLMAATAASANNVLDLQDILRRFSFDNICKFSFGLDPCCLLPSFPVSELAEAFDLASTLSAQRAMAASSFVWKAKRFFNLGNEKKLKEAVGVVNHFAQKMINEKREMGVGTRKDLLSCFMGTVNDDVYLRDIVVSFLLAGRDTVAAGLTGFFALLSKNPEVEALVREEVDRIVGPGDGVSPSFEQTRGMHYLNAAVHESMRLFPPVQFDSKYATEDDVLPDGTFVRKGSRVTYHPYAMGRMERIWGPDCLEFKPERWLKDGVFVPKCPFKYPVFQAGVRVCLGKDLALVEMKCVAAALVRRFDIRVVGPDQELRFAPGLTATFRGGLPVKVYER* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0959 499 Gene3D Cytochrome P450 53 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 SUPERFAMILY Cytochrome P450 61 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PANTHER CYTOCHROME P450 18 497 - -
Lja3g0959 499 Pfam Cytochrome P450 78 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0959 499 PANTHER CYTOCHROME P450 94C1 18 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0959 Lja-Chr3 9848665 9850502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0959 33 499 Cytochrome P450 AT2G27690 61.311 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0959 K20624 - gmx:100813091 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0959 3 9848665 9850502 Lja3g0959 3 9848665 9850502 ECH
Lja3g0959 3 9848665 9850502 Lja3g3604 3 71400292 71401946 ECH