Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0923 ATGGAATTAATGTTGGCGCCTCCTCCATGGTTGGAACAATTGTTGTCAACCACATTCTTCTCTACATGCCAAGCTCACATCAGCGCGCCCAGAAACGAATGCAACATGTTCTGCCTTGATTGCAGGGACCAAGCTGCTTTCTGCTTTTATTGCAGACAATCATGGCATCATGATCATCAAGTGATTCAAATAAGGAGATCGTCGTATCATGATGTTGTGAGGGTAGCGGAGATTCAGAAGGTTTTGGACATCAGTGAGGTGCAGACATATGTGATTAACAGTGCCAGAGTTCTTTTCCTCAATGCCAGGCCTCAGAATAGTAATGCTGCTGGTAGTGCTGCAGGGAAAACTCAATATTTGTGTCAAGTTTGCAGAAGAAATCTCCTGGACCCCTTTCGTTTCTGCTCTTTGGGATGCAAGCTTGTTGGAGTAAAGAAAAATGGGAATGGTAACTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAGAAAGCATGAAGGAATGGGAAGAAGGTTGGTATCAAAGGAGGAAGAAGAAGGAATCCACAAACAAGTATACCAAAGCACGCCATCAACACAAGCTTGCTCAAATTCAAGAAGAAGAAAAGGAATACCTCATAGGGCACCTTTTGGCCCATAA 642 0.4346 MELMLAPPPWLEQLLSTTFFSTCQAHISAPRNECNMFCLDCRDQAAFCFYCRQSWHHDHQVIQIRRSSYHDVVRVAEIQKVLDISEVQTYVINSARVLFLNARPQNSNAAGSAAGKTQYLCQVCRRNLLDPFRFCSLGCKLVGVKKNGNGNFVLSAKKDEEIGRKHEGMGRRLVSKEEEEGIHKQVYQSTPSTQACSNSRRRKGIPHRAPFGP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0923 213 Pfam PLATZ transcription factor 65 141 IPR006734 -
Lja3g0923 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 212 - -
Lja3g0923 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 212 - -
Lja3g0923 213 MobiDBLite consensus disorder prediction 188 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0923 Lja-Chr3 9389839 9391960 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja3g0923 PLATZ 1.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0923 - - aprc:113859745 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0923 3 9389839 9391960 Lja3g0923 3 9389839 9391960 ECH