Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0888 ATGGGTTTCCGTTTACATTCTATTCGACAGGCATCATTCTCAACTAGCCAAGCAGCTTCAAAATCTATAGAAGTGCCAAAGGGATATCTTGCAGTGTATGTTGGAGGAAATCAGAAGCGGTTTGTGATCCCCATATCATACTTGAACCAGCCTTCATTCCAAGTGTTGCTAAGTCAGGCTGAGGAAGAGTTTGGAGATGATCATTCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACACATAACTTCTTGCTTGAATGGACTTATAAATCTCACTATTTAG 294 0.4218 MGFRLHSIRQASFSTSQAASKSIEVPKGYLAVYVGGNQKRFVIPISYLNQPSFQVLLSQAEEEFGDDHSMGGLTIPCSEDVFQHITSCLNGLINLTI* 98
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0888 97 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
Lja3g0888 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Lja3g0888 97 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja3g0888 Lja-Chr3 9013410 9014003 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0888 14 91 Calmodulin-binding Proteins AT3G43120 48.718 1.80e-22 83.6