Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0865 ATGAAGTCACAGCTCAAAATTGCTCTTGCTTTTGTCATTAGCTTGCTCTGGATTCAGCACTCATATTGTGATGAAGCTTCTGATACATCTGGCCTGAACAAGTGGAAATGTAAATGTTCTTCTTTCCAAGGGAACCAGAACTATTCTCTTGCTAATTGCTCTAAGTCATGTGATTGCCGTTCAGGTGGTGACAAAAATGAGTCCATATGGACATGCATATGTGATCCCAATGGCTTTCCCCAAGTTGCAGCAGATGGTCGTAGCCCTAATTGCTTTCATTCCTGCAACTGTACCTGGGGAACTGTCAGCACATTACTAGGTTCAAAGAAACACATTTCCACCAAGATTGCTGTAGTCATTCTATTAGCCTGTGTTCTATGTACAACAATTGCATTTCTTGCCTTGGTTTTGTACTATGTCTACCGAAGAGACAGATTCCATATTCAATCACCAATATTCTCATCAGATAAGGAAACAAGTAGTGGTATTAGTACTGCCAACCTAATTAGTCATAGGACAGCGACTTCTTCAGTGCCGGAAACCAAATTTTCTGTAAATTCTCCTATTTTTCATATTACAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAACCAAAAAGAAACTTATCATGGAAATATTATTCAATTTTCGTTTGCTGAACTGGAAAGTGCCACTGAGAACTTTTCAGCTTCCAACCTTATCGGATTAGGCGGAAGTAGTTATGTATACCATGGTCTGCTGAAAGATGGTAGTGATGTCGCAGTTAAGCGCCTAAAAGATCATGGGGGGCCAGAAGCAGACTCATCATTTTTTAAGGAGATTGAACTATTATCTAGACTTCATCATTGCCATTTGGTGCCTTTGCTTGGATACTGCTCAGAGTTAACAGGAAAACATGTTCAGAGGCTGCTAGTGTTTGATTACATGACGAATGGGAATTTGAGGGAATGTTTAGATGGAGTTTCTGGGAAATATTTGGATTGGGCTACTCGTGTTATGATTGCGATAGGAGCTGCGAGGGGCTTGGAATATCTACATGAAGCAGCTGCTCCAAAAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAACTGGCAAGCAAAAATAATTGATCTTGGTATGGCTAAAAACTTGAGATCTGATGATCTACCCAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGGACATTTGGTTATTTTGCACCTGAATATGCTATTGTTGGTAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGCGGTCGGCAACCTATCCATAAAACAACTTCCGGAAAAGAAGAAAGCCTCGTTATATGGGCTACTCCGCGCTTACAGGATAGTAGGCGCGTAATGGCGGAGTTGGTTGATCCACAATTGAAAGGAAACTTCCCAGAAGAAGAGGTGCAAATAATGGCATACTTAGCAAAAGAGTGTTTGCTGCTGGATCCTGACACTCGGCCAACGATGAGTGAGGTGGTTCAGATTCTTACAAGTATTTCCCCAGACAAATCTAGAAGGAGAAGAAACATTCCAGCAAGCCTGTTTCAGGAACCAGAAGATGCAGAAAAGCAAAGGCACGCTCCATGCAGTAAATTTCCGACTCATACTTCATTATCCCATGGTGTTGATCACACACTTTGTGTTGAGAACCAAAATAAAGAAACAGATACAGTTTCAGCTGAGTATATTGAGAGTTTGATCCTCTTGTCTTCACAATATGATGGCTTGCATGCATCAGAAGAGGAAATGGTAGACCTCACTGAGCCGCGGTATGAATCATTTTGCATGACAAATGCCAATGTCCCTTGA 1848 0.4129 MKSQLKIALAFVISLLWIQHSYCDEASDTSGLNKWKCKCSSFQGNQNYSLANCSKSCDCRSGGDKNESIWTCICDPNGFPQVAADGRSPNCFHSCNCTWGTVSTLLGSKKHISTKIAVVILLACVLCTTIAFLALVLYYVYRRDRFHIQSPIFSSDKETSSGISTANLISHRTATSSVPETKFSVNSPIFHITGCFQKASFLFGNQKETYHGNIIQFSFAELESATENFSASNLIGLGGSSYVYHGLLKDGSDVAVKRLKDHGGPEADSSFFKEIELLSRLHHCHLVPLLGYCSELTGKHVQRLLVFDYMTNGNLRECLDGVSGKYLDWATRVMIAIGAARGLEYLHEAAAPKILHRDVKSTNILLDENWQAKIIDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKTTSGKEESLVIWATPRLQDSRRVMAELVDPQLKGNFPEEEVQIMAYLAKECLLLDPDTRPTMSEVVQILTSISPDKSRRRRNIPASLFQEPEDAEKQRHAPCSKFPTHTSLSHGVDHTLCVENQNKETDTVSAEYIESLILLSSQYDGLHASEEEMVDLTEPRYESFCMTNANVP* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0865 615 Gene3D Phosphorylase Kinase; domain 1 202 309 - -
Lja3g0865 615 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 609 - -
Lja3g0865 615 ProSiteProfiles Protein kinase domain profile. 229 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0865 615 SUPERFAMILY Protein kinase-like (PK-like) 210 509 IPR011009 -
Lja3g0865 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Lja3g0865 615 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Lja3g0865 615 Gene3D Transferase(Phosphotransferase) domain 1 310 529 - -
Lja3g0865 615 PANTHER OS01G0253100 PROTEIN 2 609 IPR045271 GO:0004714|GO:0006468
Lja3g0865 615 Pfam Protein kinase domain 231 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0865 615 SMART serkin_6 229 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0865 615 CDD STKc_IRAK 235 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0865 Lja-Chr3 8734893 8742064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0865 1 611 Receptor kinase-like Gene Family AT2G28250 50.977 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lja3g0865 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0865 - - gmx:100817870 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0865 3 8734893 8742064 Lja3g0865 3 8734893 8742064 ECH
Lja3g3699 3 73314783 73319869 Lja3g0865 3 8734893 8742064 PCT