Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0858 ATGACCAATGAGACCATCATGATAGTGCCAAACAACCCTCAATTACTAAAGTCTACAATAGAAGGAGTTGGTGTAAGTGCAATTACTAGGCTAATAAATAAGGAGAGGACAAGGGGGATAATTGATCTTGGTATGGCTAAAAACTTGAGATCTGATGATCTACCCAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGGACATTTGGTTATTTTGCACCTGAATATGCTATTGTTGGTAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGCGGTCGGCAACCTATCCATAAAACAACTTCCGGAAAAGAAGAAAGCCTCGTTATATGGGCTACTCCGCGCTTACAGGATAGTAGGCGCGTAATGGCGGAGTTGGTTGATCCACAATTGAAAGGAAACTTCCCAGAAGAAGAGAAAAGCATAGGATGGTAG 456 0.4276 MTNETIMIVPNNPQLLKSTIEGVGVSAITRLINKERTRGIIDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKTTSGKEESLVIWATPRLQDSRRVMAELVDPQLKGNFPEEEKSIGW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0858 151 Gene3D Transferase(Phosphotransferase) domain 1 27 149 - -
Lja3g0858 151 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0858 151 PANTHER OS01G0750732 PROTEIN 39 149 - -
Lja3g0858 151 SUPERFAMILY Protein kinase-like (PK-like) 31 119 IPR011009 -
Lja3g0858 151 Pfam Protein tyrosine and serine/threonine kinase 31 125 IPR001245 GO:0004672|GO:0006468
Lja3g0858 151 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE NCRK ISOFORM X1 39 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0858 Lja-Chr3 8694328 8696739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0858 13 149 Receptor kinase-like Gene Family AT2G28250 58.273 3.14e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lja3g0858 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0858 - - lja:Lj1g3v4047200.1 216.853