Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0791 ATGGATCACTTCATGGAAAACTTGCCGCCAATGGATCTCATGCGCTCCGAGAAGATGACCTTCGTTCAACTCATCATCCCCGCCGAGTCCGCTCACCGCGCCGTCTCCTATTTGGCCGAACTCGGCCTCCTTCAATTCCGTGACTTAAATGATGAAAAAAGCCCCTTCCAGAGAACGTTTGTCAACCAGGTAAAGCGATGTGCGGAAATGTCAAGAAAACTACGATTTCTCAAGGATCAGATCAGTAAAGCTGGTTTAATCTCTTCTCATTCCATCTTGCAATCAGATATTTTCTTGGAGAATTTAGAGATACATCTTGCTGAGCATGAACATGAAATAATTGAAATGAACTCCAACAGTGAGAAACTTCGGCAATCATATAATGAACTCCTGGAATTCAAAATTGTACTGCAAAAGGCATGTGGTTTTCTTGTTTCAAGTCATGGCCTTGCTGTTTCAGAAGAGAGAGAACTAGAGGAGAATGTTTACTCAAATGGAGACTATGTTGAGACACCATTTTTGTTTGAACAGGAAATTAAGCCTGAACCATCGAATCAGTCTGGTTTAAGATTTATCAGTGGGATAATTTGCAAATCCAAAGCTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCATCAGCTGATGAACAAATTGTGGACCCTATTTCAACTGAGACGGTTGAGAAAACTGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACGAAGATTCTGAAAATTTGCGACGCATTTGGAGCAAATTGCTACCCTGTTCCCGAAGATATAAGTAAACAGAGGCAAATAACTAGGGAGGTTTCATCACGTCTTGCTGACTTAGAAGCAACTTTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTATCTTCTTTAGGAGGTCAATTACCAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTCTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGCTGGTGTCCAATATTTGCAAAAGTACAGATTCAGGAGGCACTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTGGGCATAATCTTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACTAACAGTTTCACAAGTCCATATCAAGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTACACAACTATGACATTCCCATTTCTTTTTGCGGTGATGTTTGGAGACTGGGGTCATGGAATTTGCCTACTTCTGGGAGCATTGGTTCTTATAGCACGTGAAAGAAAGCTCCGCACTCAGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTGCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTTATCTACAATGAATTCTTCTCTGTTCCGTTTCACATATTCGGTGCGTCTGCTTACAGATGCCGAGATAGTTCATGCAGGGATGCACATACCACTGGCTTAGTAAAATACCGAGAACCATACCCATTCGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCCATTCTGTTCGGTGTGGTGCATATGAACTTAGGAATTATATTAAGCTATTTCAATGCTCGATTCTTTGGCAATTCACTTGATATAAGGTACCAGTTTGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCTCTTCTCATTGTTGTCAAGTGGTGTTCTGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCCTTTGACAACCTTGGTGAGAATCAGTTGCTCTGGGGCCAAAGGCCACTTCAAGTTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGTACTTATGGTGTGCTTAATACCTCTGAGGTGGATCTTGAGACGGAACCAGATTCTGCCCGGAAACATCACGAGGAATTCAATTTTAGTGAGGTCTTTGTTCACCAAATGATTCACTCTATCGAGTTTATTCTGGGTTCTGTTTCTAATACAGCATCATATCTTCGACTATGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTATGACAATCTTGCCATTCGGTTCGTGGGGCTAGTTGTTTTTGCTTTTGCAACTGCCTTTATACTACTTATGATGGAGACTCTGAGCGCTTTTCTTCACGCCTTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTTAAGCCTCTTTCCTTTGCCTCCTTAATTGAGGATGAAGATTGA 2457 0.4135 MDHFMENLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLAELGLLQFRDLNDEKSPFQRTFVNQVKRCAEMSRKLRFLKDQISKAGLISSHSILQSDIFLENLEIHLAEHEHEIIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSSHGLAVSEERELEENVYSNGDYVETPFLFEQEIKPEPSNQSGLRFISGIICKSKALRFERMLFRATRGNMLFNQASADEQIVDPISTETVEKTVFVVFFSGEQARTKILKICDAFGANCYPVPEDISKQRQITREVSSRLADLEATLDAGIRHRNKALSSLGGQLPKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKVQIQEALQRATFDSNSQVGIIFHSMDALESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTMTFPFLFAVMFGDWGHGICLLLGALVLIARERKLRTQRLGSFMEMLFGGRYVLLLMSLFSIYCGFIYNEFFSVPFHIFGASAYRCRDSSCRDAHTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIILSYFNARFFGNSLDIRYQFVPQMIFLNSLFGYLSLLIVVKWCSGSQADLYHVMIYMFLSPFDNLGENQLLWGQRPLQVVLLLLAVIAVPWMLFPKPFILKKLHNERFQGRTYGVLNTSEVDLETEPDSARKHHEEFNFSEVFVHQMIHSIEFILGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLAIRFVGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPLSFASLIEDED* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0791 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lja3g0791 818 PANTHER VACUOLAR PROTON ATPASES 5 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lja3g0791 818 Coils Coil 99 126 - -
Lja3g0791 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Lja3g0791 818 PANTHER VACUOLAR PROTON ATPASE A1 5 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0791 Lja-Chr3 8013071 8023676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0791 1 811 Primary Pumps ATPases(2) AT2G28520 78.773 0.0 1327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0791 K02154 - gmx:100800799 1490.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0791 3 8013071 8023676 Lja3g0791 3 8013071 8023676 ECH