Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0782 ATGGAAACCAACGGCGCCGAATCTGAGAACGTGAAACCGGTGGAAAACAACGGCGCCGCCGAATCGGAGAACGTCAAGCAGAAAGGAGTTCCGATCGACGGAGGAAAGTACGTCCAGTACAACATCTTGGGAAACCTCTTCGAAGTCTATGCTAACTACACTCCTCCTCTTCAACCCGTTGGTCGCGGCGCATACGGCATCGTTTGCTGTGCTACGAATTCGGAGACCAAAGAAGCGGTTGCGATTAAGAAGATTGGGAATGCGTTTGATAATAGGATTGATGCTAAGAGGACTCTCAGAGAAATCAAGCTTCTCTGTCATATGGATCATGATAATGTTATTAAGATTAAGGATATAATTCGGCCGCCGGATAGGGAGAATTTTAATGATGTGTATATTGTGTATGAGTTGATGGATACTGACTTGCATCAGATTATTCAATCTAACCAGTCTCTCACTGATGAGCACTGTCAGTATTTTCTTTATCAACTCTTAAGAGGATTGAAGTACGTCCACTCTGCAAATGTTTTGCACCGAGACCTAAAACCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACCTCTGAGACAGACCTTATGACCGAGTATGTTGTGACTCGTTGGTACAGAGCCCCTGAGTTGCTACTAAATTGTTCAGAATATACTGCAGCTATTGATATATGGTCTGTGGGCTGCATTTTGATGGAGATAGTTAGAAGGGAGCCTTTGTTTCCTGGTAAAGATTACGTTCAGCAGTTGGCGCTTATAACTGAGTTATTAGGTTCACCAAGTGACTCAGATCTTGGATTCCTCAGAAGTGACAGTGCAAAAAAGTATGTTAAGCAGCTCCCATATGTAGAAAAGCAGTCCTTTGCACAGCGATTCCCTGATATGTCCCCATTGGCAACTGATCTTGCTGAGAAAATGTTGGTTTTCGATCCCGCCAAACGGATAACTGTCGAGGAAGCGCTGAATCACCCCTATATGTCAAGTCTTCATGAGATCAATGAGGAACCGAGTTGCCCAGCTCCTTTCGTCTTTGATTTTGAACAGGCAAATTTGAATGAAGAAGATATAAAGGAGCTCATATGGAAAGAGTCTCTGAACTTCAGCCAGGATCAGGTTCAGGAATAG 1167 0.4353 METNGAESENVKPVENNGAAESENVKQKGVPIDGGKYVQYNILGNLFEVYANYTPPLQPVGRGAYGIVCCATNSETKEAVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIIRPPDRENFNDVYIVYELMDTDLHQIIQSNQSLTDEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDLMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIVRREPLFPGKDYVQQLALITELLGSPSDSDLGFLRSDSAKKYVKQLPYVEKQSFAQRFPDMSPLATDLAEKMLVFDPAKRITVEEALNHPYMSSLHEINEEPSCPAPFVFDFEQANLNEEDIKELIWKESLNFSQDQVQE* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0782 388 ProSiteProfiles Protein kinase domain profile. 54 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0782 388 ProSitePatterns MAP kinase signature. 89 192 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lja3g0782 388 Gene3D Transferase(Phosphotransferase) domain 1 138 367 - -
Lja3g0782 388 SMART serkin_6 54 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0782 388 Pfam Protein kinase domain 58 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0782 388 SUPERFAMILY Protein kinase-like (PK-like) 57 346 IPR011009 -
Lja3g0782 388 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 31 386 - -
Lja3g0782 388 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g0782 388 MobiDBLite consensus disorder prediction 1 26 - -
Lja3g0782 388 CDD STKc_TEY_MAPK 47 382 - -
Lja3g0782 388 Gene3D Phosphorylase Kinase; domain 1 37 377 - -
Lja3g0782 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Lja3g0782 388 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 31 386 - -
Lja3g0782 388 ProSitePatterns Protein kinases ATP-binding region signature. 60 84 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0782 Lja-Chr3 7929128 7933047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0782 23 381 MAP Kinase Gene Family AT1G07880 77.437 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja3g0782 Pkinase 3.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0782 K04371 - gmx:100802929 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0782 3 7929128 7933047 Lja3g0782 3 7929128 7933047 ECH