Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0751 ATGTGCCGCGCAATCATCACCAGAAACCAGGCTCAACGGCGACTGCTCGAAGAGTTTAGTTCCAATATCAGTGATCCTTCTGTGCAGCTTCAAAGCCGGGGATTGGAATTCTTTGTTGTACATAGGCTTCAATTGTCCCAGTTTAAGAAAAAGGGTGAACACAACAAGCAAGTTAACATAGACTGTGCCATTTGTCTGGGAGAGTTTGAAGAAGAGGAGTGGCTGAAACATCTTCCAAACTGCGCCCATTTTTTTCATGTTTCCTGCATTGACACATGGTTTCAGTCTCATTCAAATTGTCCCCTTTGCAGATCTTATGTATGTCATGATTCCCTGTCAACCTAG 345 0.4377 MCRAIITRNQAQRRLLEEFSSNISDPSVQLQSRGLEFFVVHRLQLSQFKKKGEHNKQVNIDCAICLGEFEEEEWLKHLPNCAHFFHVSCIDTWFQSHSNCPLCRSYVCHDSLST* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0751 114 Pfam Ring finger domain 61 104 IPR001841 -
Lja3g0751 114 ProSiteProfiles Zinc finger RING-type profile. 62 104 IPR001841 -
Lja3g0751 114 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 108 - -
Lja3g0751 114 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 108 IPR044675 -
Lja3g0751 114 SMART ring_2 62 103 IPR001841 -
Lja3g0751 114 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 109 IPR013083 -
Lja3g0751 114 SUPERFAMILY RING/U-box 61 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0751 Lja-Chr3 7617587 7617931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0751 24 107 Rapid Response to Elicitors AT3G16720 48.864 6.09e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0751 - - aprc:113859782 165.236