Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0740 ATGCAAGAGTTCAAGCAAATGTCTTTACAAAACAAGGGATTTTTGATGGTTAAGGGACACATTAATGATAGAGAGACAGTATTTGATAATCCTTCAAAAATTGAACCAAAACGACCTCATCAATGGCTCGTCAATGCTGCTGAAGTAGATCTTTTTCCAAACAAGAAACAAGCAGTAGAAAATGTAAGTGAAAGAACTAGTTCAGGATTTTCAAATGAAAATTTGACTCCCTGGCAGAACAGTCCCAATTTTCATTCAGTCCAAAACCATTTTGTTGGTCGATTATTTGGGTCTGGAACTAAGTCTAACAATATCCCTGAAAAGAATACTTCATATGTATCGGCTGAGGATTCTAATGTGAAATCAAAGTTGATCACCAATCCATATGGAGGTGATGCATCTTTTGGCCTGTCTATATCTCATTCTGTTGAAGATTCTGAAGCATGTACAAATTCTGGTGGATTTAAAAGAGTCAAAGTAGGTCAGATTAAGGATTCTGATGATGTACAGGCTCCAGAGAGGCATAATTATAATAGGCAAAGTAATGGGGATCTATATCAGACCTATAATGGCCAAGTTGATACAAGGTCAGCGTCAATAGGGCAAGTCTTTGAGAAGGATGGCAATATCACTTTAATGGGATTCCCCTACAGCAGAGGAGATGCCCAAGTCAGATCATTTGGCGCCCCCTTTGGCAAAGGAGATGATGTAGTCATATCAAGTGGCGAATCCTATAATAAAGAGAACACAAACATAATTTCTTTTGGTGGGTTCCCAGATGAACAGAACATTATCTCTGTGGGCAGGCCTGCTACAGACTATGAACAATTATATAATCAATCTTCAGTTCATTCTTCGACAACAGCCTATGAGAAAGAGTTGGGTGCATCAAACTCTGATATAGTTGCAAGTACTCCTCAGGTAGCAAGAGCAAAGTCTGAAACTGTTCCCAAGAATAAACAAGAGTTCAAAACAGCAAAGAAAGAAGCTCCCAACTGCTTCCCTTCTAATGTGAGAAGCTTGATATCAACTGGGATGCTTGATGGCGTTCCTGTGAAGTACGTCTCAGTGGCAAGGGAGGAACTTCGTGCAATTATAAAAGGTTCCGGCTATCTTTGTGGGTGCCAGTCATGTAACTATACCAAGGTTCTGAATGCTTATGAGCTTGAGAGACATGCTGGTAGCAAAACGAAACATCCAAACAATCACGTTTATTTTGACAATGGGAAGTCCATTTATCAAATAGTACAGGAATTGAAGAGTACCCCTGAAAGTTTGTTGTTTGATTCAATTCAAACAATTTTTGGCGCACCAATTAATCAGAAAGCATTTCACAGTTGGAAAGAATCATTTCAAGCAGCTACACGTGAGCTTCGACGCATTTATGGAAAGGAAGAACTTAACCTATAA 1410 0.3915 MQEFKQMSLQNKGFLMVKGHINDRETVFDNPSKIEPKRPHQWLVNAAEVDLFPNKKQAVENVSERTSSGFSNENLTPWQNSPNFHSVQNHFVGRLFGSGTKSNNIPEKNTSYVSAEDSNVKSKLITNPYGGDASFGLSISHSVEDSEACTNSGGFKRVKVGQIKDSDDVQAPERHNYNRQSNGDLYQTYNGQVDTRSASIGQVFEKDGNITLMGFPYSRGDAQVRSFGAPFGKGDDVVISSGESYNKENTNIISFGGFPDEQNIISVGRPATDYEQLYNQSSVHSSTTAYEKELGASNSDIVASTPQVARAKSETVPKNKQEFKTAKKEAPNCFPSNVRSLISTGMLDGVPVKYVSVAREELRAIIKGSGYLCGCQSCNYTKVLNAYELERHAGSKTKHPNNHVYFDNGKSIYQIVQELKSTPESLLFDSIQTIFGAPINQKAFHSWKESFQAATRELRRIYGKEELNL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0740 469 PANTHER DNA-BINDING PROTEIN 7 469 - -
Lja3g0740 469 PANTHER AUTOIMMUNE REGULATOR 7 469 - -
Lja3g0740 469 Pfam Tify domain binding domain 366 419 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0740 Lja-Chr3 7517366 7520490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0740 284 452 PHD Transcription Factor Family AT3G53680 43.503 4.51e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0740 - - gmx:100802229 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0740 3 7517366 7520490 Lja3g0740 3 7517366 7520490 ECH