Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0728 ATGGCCAACACACTCATTTCTTCTCCATCTTTCACCGGCACTCCGCTCCCTTCACTCCCTCGCCGCCACTTCCCCCACCGCGCGGCCAGGCTACTCACCACCAAGGCCTTCCACCAAATCCCCCCAATTCACTCCATTAGCCATTCCCTTGACTTCGCCGGAATCGTCGCCAGGACCGAAGGTCTTCTTTACACGCTCGCCGACGCCGCCGTCGTCGCCGTTGATCCTGCCACGACTTCCGTCGATGCTGCTACACAGAAGAACGGAGGCTGGTTCGGCTTCATTTCCGAAGCCATGGAGTACGTGCTCAAGGTGTTGAAGGATGGTCTGTCTGCTGTGCATGTGCCTTACTCGTATGGATTCGCAATCATATTGCTCACTGTTATAGTTAAGGCCGCCACGCTTCCATTGACAAAGCAACAGGTGGAATCAACACTGGCTATGCAAAATCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACCTCAAGGCTATATACGCAGGCTGGGGTTAACCCGTTGGCAGGTTGCTTACCAACTTTAGCTACAATTCCTGTCTGGATTGGTCTCTACCAAGCATTATCAAATGTGGCAAATGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTGGGTGGTCCTACTTCCATTGCTGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCTTTGGGTTGGCAGGATACTGCAGCATATCTTGTTTTACCTATTCTTTTAATTGCTACTCAATATGTTTCAATGGAAATCATGAAACCACCTCAGTCAAACGACCCTACTCAAAAGAATACACAACTTATTTTCAAGTTTCTTCCGCTCATGATCGGTTACTTCTCACTATCTGTCCCATCAGGACTAACAATTTACTGGTTTACGAACAATCTCCTGAGCACAGCTCAACAAGTATGGCTTCGCAAATTAGGAGGTGCAAAACCTGTTGTAGATGAAAATGCTGGTGGAATTATTACTGCAGGACGGGCTAAAAGATCAGCTTCTCAGCCAGCAAGGGCTGGTGAAAGGTTTAGGCAGTCAAAAGAAGAGGAGAAGAATAAGAAGTTAATGAAGGCACTGCCAGGGGAAGAACTTCAACCTTTGGCTTCTGCTTCTGATGATGGCTCCGATGTAGAAAGTGACAACAAGGGACAGGAAGATGGAGAAGAAGCTTATGCCTCAAAAGTTGGTGAAGAGGTTCAAAGTTTTTCTAGGGAGAGAAGAAGCAAGCGTTCTAAGCGGAAGCGCGCTGTATAG 1329 0.4718 MANTLISSPSFTGTPLPSLPRRHFPHRAARLLTTKAFHQIPPIHSISHSLDFAGIVARTEGLLYTLADAAVVAVDPATTSVDAATQKNGGWFGFISEAMEYVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLIATQYVSMEIMKPPQSNDPTQKNTQLIFKFLPLMIGYFSLSVPSGLTIYWFTNNLLSTAQQVWLRKLGGAKPVVDENAGGIITAGRAKRSASQPARAGERFRQSKEEEKNKKLMKALPGEELQPLASASDDGSDVESDNKGQEDGEEAYASKVGEEVQSFSRERRSKRSKRKRAV* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0728 442 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 436 - -
Lja3g0728 442 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g0728 442 MobiDBLite consensus disorder prediction 1 15 - -
Lja3g0728 442 MobiDBLite consensus disorder prediction 360 383 - -
Lja3g0728 442 MobiDBLite consensus disorder prediction 400 430 - -
Lja3g0728 442 MobiDBLite consensus disorder prediction 352 442 - -
Lja3g0728 442 Pfam 60Kd inner membrane protein 119 333 IPR001708 GO:0016021|GO:0032977
Lja3g0728 442 PANTHER OXA1 1 436 IPR001708 GO:0016021|GO:0032977
Lja3g0728 442 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 118 332 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0728 Lja-Chr3 7372168 7378322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0728 22 384 Chloroplast and Mitochondria Gene Families AT2G28800 69.189 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0728 K03217 - gmx:100817173 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0728 3 7372168 7378322 Lja3g0728 3 7372168 7378322 ECH