Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0726 ATGGAGGAGAGTCATCATCATCATCATGAGAATAATGAGGAGGAGTTGGAGATGGGAATGGGAGGGTCTAGTGGTGGGAATAATATTGCGGCGAGTTCACGGTGGAACCCTACAAAGGAGCAAATAACCTTGTTGGAGAGTCTTTACAAGCAGGGCATAAAGACTCCAACTGCGGAGGAGATACAGCAGATAACTGCTAGGCTGAGGGTGCATGGTCACATCGAAGGGAAGAATGTGTTCTACTGGTTTCAGAATCATAAGGCAAGGCAGAGACAGAAGCAGAAGCAAGAAACCATCGCTTACTTCAATCGCTTTCTTCACAGGCCTCCCCAGCCATTTTTCTCTCCTCCAATTTATCCAAATGCTTTGTGTGGCCCTTACTGTATGCCTCAACCAAACAGTGAAATTGGGTTTTATCCACAACAGTACTCAAAGGTTCTTCTACCAGTAGGTTATAGGAATCATCATGTTGAGAAGGTTGTGCCAAACGGCATGTCAAGTGTCTACAACAGCCAGCTGGTTTACGATGTAAACATGCAACAGAGAATCTCAGATCACAACATTCACTTCAATAACCAAGAAACGTTGGACCTCTTTCCTCTGCACCCAACTGGCATTTTGGAAGGGAAAACAACAAGAACAGACAAGGTGTCTTCTCTGGTTTCTGTTTCTGCTGATAGTTCCACTGATACAACTTCTGGTTCTCCTGATATTAATGAGGAAGATGGTTGTCCAGAAAACCAGCCCTTCTTTGACTTTTTTAATTCTCGACAAGGTTCTTAA 783 0.4393 MEESHHHHHENNEEELEMGMGGSSGGNNIAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHRPPQPFFSPPIYPNALCGPYCMPQPNSEIGFYPQQYSKVLLPVGYRNHHVEKVVPNGMSSVYNSQLVYDVNMQQRISDHNIHFNNQETLDLFPLHPTGILEGKTTRTDKVSSLVSVSADSSTDTTSGSPDINEEDGCPENQPFFDFFNSRQGS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0726 260 CDD homeodomain 34 94 IPR001356 GO:0003677
Lja3g0726 260 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 21 257 IPR044555 GO:0003700|GO:0099402
Lja3g0726 260 SUPERFAMILY Homeodomain-like 33 99 IPR009057 -
Lja3g0726 260 MobiDBLite consensus disorder prediction 1 31 - -
Lja3g0726 260 MobiDBLite consensus disorder prediction 218 238 - -
Lja3g0726 260 Pfam Homeodomain 32 92 IPR001356 GO:0003677
Lja3g0726 260 ProSiteProfiles 'Homeobox' domain profile. 28 93 IPR001356 GO:0003677
Lja3g0726 260 MobiDBLite consensus disorder prediction 1 16 - -
Lja3g0726 260 MobiDBLite consensus disorder prediction 218 260 - -
Lja3g0726 260 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 21 257 - -
Lja3g0726 260 SMART HOX_1 30 97 IPR001356 GO:0003677
Lja3g0726 260 Gene3D - 32 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0726 Lja-Chr3 7345042 7346688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0726 30 255 Wox Gene Family AT5G59340 42.000 4.75e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lja3g0726 Homeodomain 1.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0726 - - gmx:100801698 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0726 3 7345042 7346688 Lja3g0726 3 7345042 7346688 ECH