Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0715 ATGGGAGCATGCTTGGGGACCACGCATATTAAAGCTGAGAGCCTACTTAACACTGGATTAAGTTCAAAGCATGTGAGTGCTGATGCAAAAGATCCAAGTAATAAGGATCCCGGTGATCAGAGCAGAACAAGTAGTGAAGTTGCTGATGATCTTAGTAGCCAAAGTAGTAAGGTCTTAGAGGGGTCAGCACCTCAAACTCCGCGGAGCGTGTGTGAGATCGTGCAGTCATCTAATCTGAAGAGCTTTCCGTTGACAGAACTTAAAGTTGCCACCAGAAATTTCCGTGCAGATAGTATGATGTTAGGAGAAGGTGGTTTTGGATCAGTCTATAAGGGCTGGATTGATGAACACTCACCATCTGCTGCTAAACCTGGTACAGGCATTGTTGTTGCTGTGAAAAGGCTTAATCAGGATGGCTCCCAAGGTCACAAGGTGTCGTTGGCAAGGCATGGTATAATTCAAGAAGCAAGTCTTGAGGCTGAAGTCAACTATCTAGGCCAGCTTTCTCATCCTCATCTAGTGAAGTTGATAGGGTATTGCCTTGAAGATGAAAACCGCCTTCTGGTCTATGAATTTGTGCCTCGTGGCAACTTGGAGAACCACTTGTTCAGGAGAGGTTCATATTTTCAACCTCTTTCTTGGAGCCTCCGTTTGAAGGTTGCTCTTGGTGCTGCCAAAGGCCTTGCATTTCTTCACACTGAAACAAAAGTGACATACCGGGATTTCAAGACTTCAAGTGTCTTGCTAGATTCAAATTACAATGCAAAACTTTCTGATTTTGGATTGGCAAAGGACGGGTCAACAAGTGAAAAAAGCAATGTCACCTACGGATATGCAGCTCCAGAATACCTAGCCAATGGTCACCTCACTGCTAAGAGTGATGTCTTCAGTTTTGGAGTTGTTCTACTGGAAATTCTATCAGGCAAACGTGCTTTTGACAAGAACAGACCACAAGGGCAACACAATTTGGTAGAATGGGCAAGACCCTACCTAGCAAACAAGCGTAAGCTTTTACGTGTGTTGGATACTCGCCTTGAAGGACAATATGAATTAGAGGAAGCTTATAAGGTAGCTATTCTCTCCCTAAGGTGCCTTTCAACAGAAGCAAAGTTGAGACCATACATGGATGAGGTTGTTGCATATTTGGAGAAGCTACAAGCTCCCCATGTAAATAAAAGCAACAAAAATCATTTACGCAGAAAAAGTGCTGATGATTTTATCCCTGTTAGAACCATCAAAGCTCATCTCCACCCCACTGCTTCACTGCCTTGTACACTATCCTTAGCATGA 1290 0.4372 MGACLGTTHIKAESLLNTGLSSKHVSADAKDPSNKDPGDQSRTSSEVADDLSSQSSKVLEGSAPQTPRSVCEIVQSSNLKSFPLTELKVATRNFRADSMMLGEGGFGSVYKGWIDEHSPSAAKPGTGIVVAVKRLNQDGSQGHKVSLARHGIIQEASLEAEVNYLGQLSHPHLVKLIGYCLEDENRLLVYEFVPRGNLENHLFRRGSYFQPLSWSLRLKVALGAAKGLAFLHTETKVTYRDFKTSSVLLDSNYNAKLSDFGLAKDGSTSEKSNVTYGYAAPEYLANGHLTAKSDVFSFGVVLLEILSGKRAFDKNRPQGQHNLVEWARPYLANKRKLLRVLDTRLEGQYELEEAYKVAILSLRCLSTEAKLRPYMDEVVAYLEKLQAPHVNKSNKNHLRRKSADDFIPVRTIKAHLHPTASLPCTLSLA* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0715 429 SUPERFAMILY Protein kinase-like (PK-like) 69 384 IPR011009 -
Lja3g0715 429 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Lja3g0715 429 MobiDBLite consensus disorder prediction 21 69 - -
Lja3g0715 429 Pfam Protein tyrosine and serine/threonine kinase 100 379 IPR001245 GO:0004672|GO:0006468
Lja3g0715 429 PANTHER OS01G0588500 PROTEIN-RELATED 44 401 - -
Lja3g0715 429 Gene3D Transferase(Phosphotransferase) domain 1 193 407 - -
Lja3g0715 429 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 44 401 - -
Lja3g0715 429 MobiDBLite consensus disorder prediction 38 69 - -
Lja3g0715 429 ProSiteProfiles Protein kinase domain profile. 95 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0715 429 Gene3D Phosphorylase Kinase; domain 1 66 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0715 Lja-Chr3 7148958 7152369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0715 64 382 Glycoside Hydrolase AT3G07070 41.840 7.25e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lja3g0715 PK_Tyr_Ser-Thr 3.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0715 - - gmx:100812366 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0715 3 7148958 7152369 Lja3g0715 3 7148958 7152369 ECH
Lja3g2771 3 41381723 41384790 Lja3g0715 3 7148958 7152369 PCT