Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0714 ATGAAGTGCTTCCATTTCTCAAACGGCGAGCGGCGAGGCGAAGATGAAGACGGCGGAGCCGGCGGTTCCAGCTCAAGAGGATCAAGGGTCTCATGGGCGCGCTCTCTCAGCCTCATGGACACTCGCAGGTCCGAGTTTGACTCAACTGGGTCAAGAGACTACTCCGACACGGTGGGCTTCCACGAGTTCCTCTCTCTCCGGCGAGCCAACAACCTTCGCCTCTTCTCCTTCTCCGACCTCAAAACCGCCACGCGTGGCTTCAGCAGAACCCTCTTGATCGGCGAGGGAGGCTTCGGTTCTGTCTACAGAGGACTCATCGATGATTCCCAAATCGATGTTGCTATCAAGCAGTTGAATCGTAATGGCCACCAGGGGCATAAGGAGTGGATTAATGAAGTGAACTTGTTGGGGGTGATCAAGCATCCAAATCTTGTGAGGTTAGAGGGTTACTGTGCAGAAGATGATGAAAGAGGGATTCAAAGACTTTTGGTGTATGAGTTTATGCCAAATAAGAGCTTGGAAGATCATCTCTTGGCTCGGGTTCCCTCGTCATTTCTCCCTTGGACTACTAGATTAAGGATTGCTCAAGATGCAGCTCGTGGCTTGGCATACCTGCATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAAACATCCAACATCTTGCTGGATGAGGACTTCAATGCAAAGCTATCTGATTTTGGACTTGCTAGGCAAGGACCCACAGAAGGGTCTGGTTACGTTTCAACATCAGTTGTCGGCACTATTGGCTATGCTGCGCCTGAGTATGTTCATACTGGTAAGCTGACTGCTAAGAGCGATGTCTGGAGCTTTGGTGTAGTTCTTTATGAGCTTATCACCGGGAGGAGAGCTGTAGAAAGAAACCTACCAAGAAATGAACAAAAGCTTTTAGAGTGGGTAAGACCTTATATTTCTGATCCTAGGAAGTTCCGTGTTATTGTCGATCCTCGGCTTGAAGGACAGGATTGCATAAAATCAGCTCATAAACTTGCAGTCCTAGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCCCGGCCGAAAATGAGTGAGGTGGTTGAGATTCTTGGAAACATTATTGACGAGACAGCTCCTCAGGATGAATGCATCTCCCAAGCTGTTGTAGCGCCTGAAGAAGAAAAAGAATTATCTGTTGAGAACACTGCACCTGAACCAGCTAAACAGGGGAATAGTTATTTGAAGAAGGTTTTTGAATTCAGAGACATGGTCAGCTTTAGAAATAAGTCTATTGGAAGATTGGATTGGAAAAGTTGGGCGCCTGGGCTAGTAAGAACATGGTGA 1326 0.4706 MKCFHFSNGERRGEDEDGGAGGSSSRGSRVSWARSLSLMDTRRSEFDSTGSRDYSDTVGFHEFLSLRRANNLRLFSFSDLKTATRGFSRTLLIGEGGFGSVYRGLIDDSQIDVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLEGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVPSSFLPWTTRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPTEGSGYVSTSVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYISDPRKFRVIVDPRLEGQDCIKSAHKLAVLANKCLMKQPKSRPKMSEVVEILGNIIDETAPQDECISQAVVAPEEEKELSVENTAPEPAKQGNSYLKKVFEFRDMVSFRNKSIGRLDWKSWAPGLVRTW* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0714 441 Gene3D Phosphorylase Kinase; domain 1 62 167 - -
Lja3g0714 441 CDD STKc_IRAK 93 367 - -
Lja3g0714 441 PANTHER OS01G0588500 PROTEIN-RELATED 40 390 - -
Lja3g0714 441 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Lja3g0714 441 Pfam Protein kinase domain 92 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0714 441 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 40 390 - -
Lja3g0714 441 MobiDBLite consensus disorder prediction 1 19 - -
Lja3g0714 441 SUPERFAMILY Protein kinase-like (PK-like) 68 364 IPR011009 -
Lja3g0714 441 Gene3D Transferase(Phosphotransferase) domain 1 168 386 - -
Lja3g0714 441 MobiDBLite consensus disorder prediction 1 29 - -
Lja3g0714 441 ProSiteProfiles Protein kinase domain profile. 87 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0714 Lja-Chr3 7145171 7148126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0714 70 394 Glycoside Hydrolase AT3G07070 48.094 1.19e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lja3g0714 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0714 - - gmx:100305425 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0714 3 7145171 7148126 Lja3g0714 3 7145171 7148126 ECH