Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0705 ATGGATCCAACTTTTTATGGGGACAGCGATTTCACAAACGGATACCAGTTTTGTGAAGAAGGGAACATATTTGTCTCGGATCCAAATCCATATGCAGCATACTGGGATGTGTATCATCAACATGTTGACCCTCTTGGTTTTGCAGCAAATACAAGCTCTGTAGAAGAAGGTTCTGTGACATCCATGTCCATGAACTCGGTGACAGATCCTTCTCTAGAAGACACTGACTTCTCAGAAACCACCAAGTTCATAAGCCAAATCCTGATGGAAGAGAACCTTGAACAGGGTCCATTTTATGACTCCTTGAGCCTGCAACTCACAGAGAAATCATTCCATGATGCTCTCATAGAAAACAACTCATCTCTATCGCCCAATCAACACCACTTCAATGTTCGAAGCCCTTACTGTGAAACAACTAGCAGTGACAGTGACAACAGCAGCAATTTACACTACAATTCTGGTGAGTTGAATTCCCCTCCTCTGGATACCCCTGTTGCTGTTATTGGTAATCATGCTTTTCAACTTAATTCTCATGGACTGCTAGATTTGGATTCTTCTGTTACCAAACCATTGGCGCAAAATATTTTCAGTGATGCAGATTCTGTCTCCCAATTCAGGAGAGGGTTAGAGGAAGCTACCAAGTTTCTTCATCCTCCAGAACCCCTGATTGAGACCGGTCTAGATTCAAGGGGAGAATCATCCAATATAGTTGAGGAGAATTCTTTTGGGTTAAAGGGTCGTAGAAAGAGCCGTGAGCGTGAAGAAAGTGATTCTAATGAAGAAGGGAGAAGTACCAAGCAATCAGCAGTTGGTGTTGTTGATGAGGATGACTTATCTGATATGTTTGAACGAGTGCTGATTAATATGGAACAATTACCACTTGGTAACGAACACGATTCCATAGAGAGTGGCTTGGCAAAAGAGAAACAGCAAGGTGAAAAGCCACCTTCATCTGATGGAAGGAAGGCTCATCCAAAGAAACAAGGCAGGAAGAAGGAAACGGTGGACGTGAGGGCTCTTCTGCTTCTTTGTGCACAAGCTATTCATGCCAATGATAACAGGGCTGCTAATGAACTTCTAAAGCAGATAAGACAGCACTCTTCTCCCTTTGGTGATGGGTCACAAAGATTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGGTTGATTGGGGATGGTGCCGCTGCACAGCAATTTTTTAACGCTCCTACCTTCAAGACAACCTTTGGTGCTGATTTTTTCAAAGGTTACCAAGTTTATCTAGCTTCTAACCCATTCAAAAAGTTTGCACATTTCTATGTTAACAAAATGATTAAGAAAGCAGCTGCAAAAGCTGAAACCCTTCATGTTATTGATTTTGGTATCTTCTTTGGCTTCCAATGGCCATTACTCATCAAGTTTTTGTCAGAAAGAGAAGGTGGACCTCCCAAGCTGAGGATCACAGGGATAGAATACCCTTTACCTGGCTTTCGTCCCACACAAAGAATTGAGGAGACTGGTCGTCGTTTGGCTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACACTGCTATAGCATCACGGAACTGGGAAACCATTCGAGTTGAAGACCTTAAAATTAAGAGTAACGAGTTTGTTGCTGTCAATTGCATGATGAGGTTCAAAAATTTGCTAGATGAGACTACTGAAATGAACAGTCCAAGAGATGTTGTTCTGCATTTGATCAGGAGTATAAATCCGGATATTTTTGCTCAGTCCATCGTTAATGGATCTTTCAATGCCCCTTTCTTTGTCACACGGTTTAGGGAGGCCTTGTTCTATTATTCTACTGTTTATGATATTTTTGACAGTGTCATACCCCAGGAACACCCATGGAGGATGATGATTGAGTGGGAGATCGTGGGTCGGATCTCTCTGAATGTGATAGCATGTGAAGGTTTGGAGAGGTTTGAGAGACCTGAGACATATAAACAATGGCAGGTTAGGAACAAAAGGGCTGGTTTCAAGCAGCTTCCTCTGAACCAGAAGTTAATGGCCAAATTTAGGTCAAAGTTAAGGAAATGGCACCATGATGATTTTGTCATTGATGAAGACAACAATTGGATGCTTCAATGTTGGAAAGGACGCATTATCTGTGGTTCTACTATTTGGGTGCCTGCATAA 2145 0.4228 MDPTFYGDSDFTNGYQFCEEGNIFVSDPNPYAAYWDVYHQHVDPLGFAANTSSVEEGSVTSMSMNSVTDPSLEDTDFSETTKFISQILMEENLEQGPFYDSLSLQLTEKSFHDALIENNSSLSPNQHHFNVRSPYCETTSSDSDNSSNLHYNSGELNSPPLDTPVAVIGNHAFQLNSHGLLDLDSSVTKPLAQNIFSDADSVSQFRRGLEEATKFLHPPEPLIETGLDSRGESSNIVEENSFGLKGRRKSREREESDSNEEGRSTKQSAVGVVDEDDLSDMFERVLINMEQLPLGNEHDSIESGLAKEKQQGEKPPSSDGRKAHPKKQGRKKETVDVRALLLLCAQAIHANDNRAANELLKQIRQHSSPFGDGSQRLAHYFANGLEARLIGDGAAAQQFFNAPTFKTTFGADFFKGYQVYLASNPFKKFAHFYVNKMIKKAAAKAETLHVIDFGIFFGFQWPLLIKFLSEREGGPPKLRITGIEYPLPGFRPTQRIEETGRRLANYCKRFNVPFEYTAIASRNWETIRVEDLKIKSNEFVAVNCMMRFKNLLDETTEMNSPRDVVLHLIRSINPDIFAQSIVNGSFNAPFFVTRFREALFYYSTVYDIFDSVIPQEHPWRMMIEWEIVGRISLNVIACEGLERFERPETYKQWQVRNKRAGFKQLPLNQKLMAKFRSKLRKWHHDDFVIDEDNNWMLQCWKGRIICGSTIWVPA* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0705 714 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 64 713 IPR005202 -
Lja3g0705 714 MobiDBLite consensus disorder prediction 242 262 - -
Lja3g0705 714 MobiDBLite consensus disorder prediction 133 157 - -
Lja3g0705 714 MobiDBLite consensus disorder prediction 304 333 - -
Lja3g0705 714 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 64 713 - -
Lja3g0705 714 Pfam GRAS domain family 338 711 IPR005202 -
Lja3g0705 714 MobiDBLite consensus disorder prediction 217 274 - -
Lja3g0705 714 ProSiteProfiles GRAS family profile. 328 712 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0705 Lja-Chr3 7068155 7071280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0705 74 713 GRAS Transcription Factor Family AT2G29060 46.626 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja3g0705 GRAS 7.6e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0705 - - lja:Lj0g3v0303739.1 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0705 3 7068155 7071280 Lja3g0705 3 7068155 7071280 ECH