Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0702 ATGACAGATCCATGGTTTGCTGAAGAAGGAAGCATACTTGTCTCAGATCCAAATCAATATGCATCAGACTGGGATGCCTTTCAACAATATGAAAGCCTCTCAGCGAATTCAAACCCTGTAGAAGGTTCTGTTTCATCCATGTCCATGAACACGGTTACAGATCCTTCACTAGAAGACACCGATTTCTCAGAAACCGCCTTGTTCATCAGTCAAATCCTCATGGAAGAAAACGTTGAACAGAGTCCATTTTATGATTCACTCAGCTTGCAACTCACTGAGAAATCATTCCATGATGCTCTCATAAACCCATCTCTGTCCCCCAATCAACAACACCCCTTTGATTTTCAAAACAGTGAAACCACCACCAGCAACAGCAACAATAGCAGTAACAGTTCTCGTGAGTTGAAACCCCCTTCTCCGGATACCCCTGTTTCTGTTCTTCGTGATAATCATGATTTTCAATTCAATTCCCGTCCTTTGCATGATTTGGATTCTTCTGCTACCAATTTGTTGGCACAAGATATCTTCAATGATGCAGATTCTGTTTCCCAATTCAAGAGAGGGTTAGAGGAAGCTAGCAAGTTTCTTCCGGTGGAGCCTCGGATCGTGACCGGTCTAGACTCGAATGGACAACCGCCAAACATGCTTAGGTTGAAGAATCGAAAGCATCATGATCGCGAAGAAGAAAGTGATTCTAAGGAAGAAGGGAGGAGAAGTAACAAGAGAGGGTTAGAGGAAGCTAGCAAGTTTCTTCCGGTGGAGCCTCGGATCGTGACCGGTCTAGACTCGAATGGACAACCGCCAAACATGCTTAGGTTGAAGAATCGAAAGCATCATGATCGCGAAGAAGAAAGTGATTCTAAGGAAGAAGGGAGGAGAAGTAACAAGCAATCAGCATTTAGTGTTGTTGATGAAGAAAACAATCAAGACCTATCAGAAATGTTTGATAAAGTGTTGCTTAATCTGGAACATTTGCCGCTGTGTAATGAAGTCCATGGCTCGCAGAATGGAGAAGTGAAAGCGGAGAAGGAAGGTGAAAAGGATAAGTCACCTTCAGCTAATGGAGGAGGGAAGGGTCGTCCTAAGAAACAAGGAAGGAGCAAGGAAACGGTGGATTTGAGGGCTCTTCTGCTTCTATGCTCACAAGCTGTTTACTCAAATGACAACAGGGCTGCGAATGAATTTCTAAAGCAGATTAGGGATCACTCTTCTTCCTATGGGGATGCATCACAAAGATTGGCTCATTACTTTGCCAATGGCCTTGAGGCGCGCTTGGGCGGTGATGGAACCGGCGCACAAATATTCTATTCCTCACCAAGCTCCCAGAGGATCTCTACTGCTAAGTATCTGAAAGCTTACCAAGCTCATCTAAGTACAAGCCCATTCAAAAAGTTTGCATATTTCTTTGCAAATAAAATGATTATGAAAGAAGCTGCAAAAGCAGAATCTCTTCATATCATTGATTTTGGTATCCTATATGGTTTCCAGTGGCCAATTCTTATTAAGTTCTTATCAGAAAGAGATGGTGGACCTCCCAAATTGAAGATCACAGGGATAGAGTTCCCTTTACCCGGATTTCGGCCCACGGAAAGAATTGATGAGACCGGTCATCGTCTCACCAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAATGCCATTGCATCAAAGAACTGGGAAACAATTGAAGTTAAAGACCTTAGAATTCAGACTAATGAGTTTGTTGCTGTGAATTGTATGATGAGGTTCAAGAATTTGCTGGATGAGACTATTGAAGAGAACAACAGTCCTAGAGATGCTGTTCTGCAATTAATTAGGAAGATCAATCCGAATATTTTTACTCAATCAATCTCTAATGGATCTTTCAATGCCCCTTTCTTTGTCACGCGGTTTAGGGAGGCTTTATTCCATTTTTCTGCTACTTTTGACATGTTTGACACTGTCATATCTAGGGATAACCAATGGAGGAGGTTGATTGAGAGAGAGAGTGTGGGGCGGGAGGCTATGAATGTGATAGCATGTGAAGGTTTGGAGAGGGTTGAGAGGCCTGAGACATATAAAAGGTGGCAGGTTAGGAATACAAGGGCTGGTTTCAAGCAGCTACCCCTAAATGAGGGACTAATGGACAAATTTAGGACCAAGTTAAAGAAATGGTACCATAAGGACTTTGTCTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTATGTATGCTTCCACTTGTTGGGTACCGGCTTGA 2256 0.4286 MTDPWFAEEGSILVSDPNQYASDWDAFQQYESLSANSNPVEGSVSSMSMNTVTDPSLEDTDFSETALFISQILMEENVEQSPFYDSLSLQLTEKSFHDALINPSLSPNQQHPFDFQNSETTTSNSNNSSNSSRELKPPSPDTPVSVLRDNHDFQFNSRPLHDLDSSATNLLAQDIFNDADSVSQFKRGLEEASKFLPVEPRIVTGLDSNGQPPNMLRLKNRKHHDREEESDSKEEGRRSNKRGLEEASKFLPVEPRIVTGLDSNGQPPNMLRLKNRKHHDREEESDSKEEGRRSNKQSAFSVVDEENNQDLSEMFDKVLLNLEHLPLCNEVHGSQNGEVKAEKEGEKDKSPSANGGGKGRPKKQGRSKETVDLRALLLLCSQAVYSNDNRAANEFLKQIRDHSSSYGDASQRLAHYFANGLEARLGGDGTGAQIFYSSPSSQRISTAKYLKAYQAHLSTSPFKKFAYFFANKMIMKEAAKAESLHIIDFGILYGFQWPILIKFLSERDGGPPKLKITGIEFPLPGFRPTERIDETGHRLTNYCKRFNVPFEYNAIASKNWETIEVKDLRIQTNEFVAVNCMMRFKNLLDETIEENNSPRDAVLQLIRKINPNIFTQSISNGSFNAPFFVTRFREALFHFSATFDMFDTVISRDNQWRRLIERESVGREAMNVIACEGLERVERPETYKRWQVRNTRAGFKQLPLNEGLMDKFRTKLKKWYHKDFVFDEDNNWMLQGWKGRIMYASTCWVPA* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0702 751 MobiDBLite consensus disorder prediction 101 147 - -
Lja3g0702 751 MobiDBLite consensus disorder prediction 334 368 - -
Lja3g0702 751 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 242 IPR005202 -
Lja3g0702 751 MobiDBLite consensus disorder prediction 336 353 - -
Lja3g0702 751 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 244 750 IPR005202 -
Lja3g0702 751 MobiDBLite consensus disorder prediction 218 249 - -
Lja3g0702 751 Pfam GRAS domain family 373 748 IPR005202 -
Lja3g0702 751 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 50 242 - -
Lja3g0702 751 MobiDBLite consensus disorder prediction 101 138 - -
Lja3g0702 751 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 244 750 - -
Lja3g0702 751 MobiDBLite consensus disorder prediction 203 308 - -
Lja3g0702 751 ProSiteProfiles GRAS family profile. 364 749 IPR005202 -
Lja3g0702 751 MobiDBLite consensus disorder prediction 273 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0702 Lja-Chr3 6992739 6996236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0702 68 751 GRAS Transcription Factor Family AT1G07530 46.492 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja3g0702 GRAS 1.4e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0702 - - gmx:100795855 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0702 3 6992739 6996236 Lja3g0702 3 6992739 6996236 ECH