Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0701 ATGCCAATGAACTCGGTCATGGATCCTTCTCTAGAAGACACTGATTTCTCAGAAACCGGCAAGTTCATCAGCCAAATCTTGATGGAAGAAAACGTTGAACAGAGTCCATTTTATGATTCCCTCAGCTTGCAACTCACTGAGAAATCATTCCACGATGCTCTCATCAACTCATCTCAAAATGAAACCACCACCAGCAACAATAGCAGTAACACTTCTCGTGATTTGAAACCACCTTCTCCGGATACTCCTGTTTCTGTTCTTCGTGATAATCATGGTTTTCAGTTCAACTCCCGTGCCATATATCAACCTCTGCATGATTTGGATTCTTCTGCTACCAGTTTGTTGGCACAAGATATCTTCAATGATGCAGATTCTGTTTCTCTATTCAAGAGAGGGTTAGAGGAAGCTAGCAAGTTTCTTCCGGTGGAGCCTCGGATCGTGACCGGTCTAGACTCTAATGGACAACCGCTAAACATGCTTGGATTGAAGAATCGAAAGCATCATGATCGCGAAGAAGAAAGTGATTCTAAGGAAGAGGGGATGAGAAGTAACAAGCAATCAGCATTTAGTGTTGTTGATGAGGATAACAATCAAGACCTATCAGAAATGTTTGATAAAGTGTTGCTTAATCTGGAACATTTGCCAATGTGTAATGAATACAAAGGGTTGCAGAATGGAGGAGTGAAAGCGGAGAAGGAAGGCGAAAAGGAAAAGCCACCTTCATCTAATGGAGGAGGGAAGGGTCGTCCTAAGAAGCAAGGACGGAGCAAGGAAACGGTGGATTTGAGGGCTCTTCTGCTTCTATGCTCACAAGCTATTTACACAAATGACAACAGGGCTGCTAATGAATTTCTAAAGCAGATTAGGGACCATTCTTCTCCCTATGGCGATGCATCGCAAAGATTGGCTCATTACTTCGCCAATGGCCTTCAGGCGCGCTTGGGCGGTGATGGAACCGGTGCGCAAATATTCTATTCCTCTCCGAGCTCCAAGAGGATCACTGCTGCTGAGTTTTTGAAAGCCTACCAAGCTCATCTATCTTGCAGCCCATTCAAAAAGTTTGCATATTTCTTTGCAAATAAGATGATCATGAAAGAAGCTGCAAAAGCAAAAACTCTCCATATCATTGATTTTGGCATCCTGTATGGTTTCCAGTGGCCAATTCTTATTAAGTTCTTATCAGAAAGAGATGGTGGACCTCCCAAGTTGAAGATCACAGGGATAGAGTTCCCTTTACCTGGCTTTCGCCCCACAGAAAGAATTGATGAGACTGGTCGTCGTCTGGCCAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAATGCCATAGCATCAAGGAACTGGGAAACGATTCGAGTTGAAGACCTTAAAACTGAGGCCAATGAGTTTGTTGCTGTGAACTGTATGATGAGGTTTGAGAATTTACTGGATGAGACTATTGAAGAGAACTGTCCTAGATATGCTGTTCTGCGTTTGATCAGGAAGATCAATCCAAATATTTTTACTCAGGCAATCTCTAATGGATCTTTCAATGCCCCTTTCTTTGTCACACGGTTTAGGGAGGCTTTGTTCCATTTTTCTTCTATTTATGACATGTGTGACACTGTCATATCCAGGGATAACCAATGGAGAATGATGATTGAGAGAGAGTTTGTGGGTCGCGAGGCTATGAATGTGATAGCATGTGAAGGATTGGAGAGGGTTGAGAGACCTGAGACATACAAAAGGTGGCAGGTTAGGAATACAAAGGCTGGTTTCAAGCAGCTACCATTGAATGAGATTCTAATGACCAAATTTAGGACCAAGTTAAAGGAATGGTACCATAAAGACTTTGTCTTTGATGAAGACAATAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTTTGTATGCTTCCACTTGTTGGGTACCGGCTGGATGA 1923 0.429 MPMNSVMDPSLEDTDFSETGKFISQILMEENVEQSPFYDSLSLQLTEKSFHDALINSSQNETTTSNNSSNTSRDLKPPSPDTPVSVLRDNHGFQFNSRAIYQPLHDLDSSATSLLAQDIFNDADSVSLFKRGLEEASKFLPVEPRIVTGLDSNGQPLNMLGLKNRKHHDREEESDSKEEGMRSNKQSAFSVVDEDNNQDLSEMFDKVLLNLEHLPMCNEYKGLQNGGVKAEKEGEKEKPPSSNGGGKGRPKKQGRSKETVDLRALLLLCSQAIYTNDNRAANEFLKQIRDHSSPYGDASQRLAHYFANGLQARLGGDGTGAQIFYSSPSSKRITAAEFLKAYQAHLSCSPFKKFAYFFANKMIMKEAAKAKTLHIIDFGILYGFQWPILIKFLSERDGGPPKLKITGIEFPLPGFRPTERIDETGRRLANYCKRFNVPFEYNAIASRNWETIRVEDLKTEANEFVAVNCMMRFENLLDETIEENCPRYAVLRLIRKINPNIFTQAISNGSFNAPFFVTRFREALFHFSSIYDMCDTVISRDNQWRMMIEREFVGREAMNVIACEGLERVERPETYKRWQVRNTKAGFKQLPLNEILMTKFRTKLKEWYHKDFVFDEDNNWMLQGWKGRILYASTCWVPAG* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0701 640 Pfam GRAS domain family 262 636 IPR005202 -
Lja3g0701 640 MobiDBLite consensus disorder prediction 227 242 - -
Lja3g0701 640 ProSiteProfiles GRAS family profile. 253 637 IPR005202 -
Lja3g0701 640 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 638 IPR005202 -
Lja3g0701 640 MobiDBLite consensus disorder prediction 162 182 - -
Lja3g0701 640 MobiDBLite consensus disorder prediction 57 78 - -
Lja3g0701 640 MobiDBLite consensus disorder prediction 151 194 - -
Lja3g0701 640 MobiDBLite consensus disorder prediction 57 83 - -
Lja3g0701 640 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 7 638 - -
Lja3g0701 640 MobiDBLite consensus disorder prediction 227 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0701 Lja-Chr3 6981858 6984576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0701 13 638 GRAS Transcription Factor Family AT2G29060 48.352 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja3g0701 GRAS 3.1e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0701 - - adu:107476834 814.683