Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g0690 | ATGGGGGAAGAGGTGAGGATGATGGATGAAGAGCGTTTGATGGAGTGGGAGAAGGGTCTCCCAAGCGTTCACGATCTAACTCCGCTTTCTCAGCCGCTGATCCCGCCGGAGCTCGCAACCGCCTTCAGCATCTCGCCGGAGCCCCGCCGCACACTCCTCGACGTCAACCGCGCATCCCGCAACACGCTCTCCATCCTCCGCAGCGGTGGAGCCCCACTCCAGGCTCTTTCCTCCTCCGACGAGGAGGGCGAGGGCGGAGGTGGCGGAGGTGAGGAGGACGACACCACCGATCGCGACGGGTCGGGTGGGTCAGGGTCACGGAAACAGAGGAAGGTGGATTGCGCGGCGGAGGAGGCTGACTCGGCGGTTCGGACGACGGATACGGCGACGCTGAAACGGCCGCGTCTGGTGTGGACACCGCAGCTGCATAAGCGGTTCGTGGACGTGGTGGCGCACCTCGGGATCAAGAACGCGGTGCCGAAGACGATCATGCAGTTGATGAACGTGGAAGGGTTGACCCGAGAGAACGTGGCGAGTCATCTTCAGAAGTACCGGCTGTACTTGAAGAGGATGCAGGGTCTCTCCAACGAGGGTCCTTCTTCCTCCGATCATCTCTTTGCTTCCACCCCTGTTCCTCAGAGCTTGCATGATTCTGCTGCTGCTGCTGTTGCTGCAACTGCACATTCAAATTCGCATTCACAAACACATTCCCATTCACATGGACATGGGAATTCTTCTCACCTTCCTGTTCCGATTCCCATGCCTTATCCACCTCCGATGATGTCTATGCCCTTCCATGGTATGCCTCACCTGCATCATGGCCATGGACACATGGGTATGCCGCTTCCTTCTTCCTCTGCCACCTCCTCTTATCGCTCTCAATACCCCTTTAACATGTTGCACCAGAGGGATTGGCCTCACCCTCATCTTGCTCCTAATGATAATAAATGA | 951 | 0.5773 | MGEEVRMMDEERLMEWEKGLPSVHDLTPLSQPLIPPELATAFSISPEPRRTLLDVNRASRNTLSILRSGGAPLQALSSSDEEGEGGGGGGEEDDTTDRDGSGGSGSRKQRKVDCAAEEADSAVRTTDTATLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVPQSLHDSAAAAVAATAHSNSHSQTHSHSHGHGNSSHLPVPIPMPYPPPMMSMPFHGMPHLHHGHGHMGMPLPSSSATSSYRSQYPFNMLHQRDWPHPHLAPNDNK* | 317 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g0690 | 316 | Pfam | Myb-like DNA-binding domain | 137 | 185 | IPR001005 | - | |
Lja3g0690 | 316 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 138 | 189 | IPR017930 | - | |
Lja3g0690 | 316 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 134 | 186 | IPR006447 | GO:0003677 | |
Lja3g0690 | 316 | SUPERFAMILY | Homeodomain-like | 130 | 190 | IPR009057 | - | |
Lja3g0690 | 316 | MobiDBLite | consensus disorder prediction | 91 | 120 | - | - | |
Lja3g0690 | 316 | MobiDBLite | consensus disorder prediction | 216 | 252 | - | - | |
Lja3g0690 | 316 | MobiDBLite | consensus disorder prediction | 224 | 244 | - | - | |
Lja3g0690 | 316 | Gene3D | - | 130 | 192 | - | - | |
Lja3g0690 | 316 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 1 | 307 | - | - | |
Lja3g0690 | 316 | MobiDBLite | consensus disorder prediction | 66 | 128 | - | - | |
Lja3g0690 | 316 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 1 | 307 | IPR044841 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g0690 | Lja-Chr3 | 6845579 | 6848225 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g0690 | 1 | 217 | G2-like Transcription Factor Family | AT3G46640 | 60.581 | 3.94e-83 | 252 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Lja3g0690 | Myb_DNA-binding | 1.3e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja3g0690 | - | - | aprc:113858844 | 358.992 |