Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0679 ATGGAGGAAGCAGCAGCTGCAGGCATAGTGATCACATTTGGTCTGATCATATGGGCATTGAAGGTGGTGAACTGGTTGTGGCTGAGGCCGAAGAAGATAGAGAAGTTGCTAAGAGAGCAAGGTCTCAAAGGAAATCCATACAGGATTCTGATCGGTGACTTGAAGGATTTTGTCAAGATGCAAAAGGATGCCGGATCCAAACCAATGAGTTTCTCTCATGAAATAGTGTCTCGTGTGTCTCCCTATGTCAAACTCACTGTTGACAAACACGGAAAGAATTCTTTTATCTGGTTTGGACCAACACCGTGGGTGATCCTCACAGATCCTGAATTAATAAAAAACGTGTTAAACAAGATCCATGACTTCCCAAAGCCTGATACTAATCCGATTTTAAAGTTACTAGCTACAGGTCTTGTAACCCATGAAGGAGAAAAATGGAGCAGGCATAGAAGGATAATTAACCCTTCATTCAATATAGAAAAATTGAAGATCATGTTACCAATATTCTTCAAAAGCTGCAATGATCTAATTAGCAAATGGGAAGGAATGTTGTCGTCAGATGGATCATGCGAAATGGATGTATGGCCTTTCCTTCAGAATTTTGCCAGCGATGTTATTTCTCGGACAGCATTTGGAAGTAGTTATGAAGAAGGCAGAAGAATATTCCAACTTCAAAAAGAGCAAGCTGAACTTACAATGAAAGTTATGGTGAAAGCTTACATCCCTGGATGGAGGTTTCTACCTACTACTATTCATCGGAGGATGAAGGAAATCTGCACAGATGTAAATGCTTCCCTTAAGGATATCATTGAAAAGAGGGAGAGAGCACTAAATGCGGGTGAAGCCAGTAAGAACAACTTGTTAGATATTCTTCTGGAGTCAAATCGCAAGGAAATTCAAGAACATGGAAACAACAAGAATGTTGGAATGAATCTTGAAGACATAATTGAAGAATGCAAGCTATTCTACTTTGCAGGGCAGGAGACCACTTCAGTTTTGCTTGTTTGGACGATGGTGTTACTAAGTAGGTACCCGGATTGGCAAGCACGCGCAAGGGAGGAAGTATTAAGAGTATTTGGTAATCAAAAACCAGATTTTGATGGTCTAAGTCAACTTAAGATTGTCACCATGATTTTGTATGAGGTTCTTAGGTTATACCCACCAGCAGTGGGGCTAGTCCGAAATGTTCACAAAGATGTGAAACTTGGAAACCTAGCATTACCTGCTGGAGTGCAGGTTTATTTACCACCAGTTTTGGTTCACCATGATTGTGAGCTATGGGGTGATGATGCAAAAGAGTTCAATCCTGAGAGATTTTCTGAAGGAGTTGTAAAAGCAACAAAAGGAAGAGTTTCATTCTTTCCTTTTGGATGGGGTCCTAGAATATGTATTGGACAAAACTTTTCCATGTTGGAAGCAAGGATGGCCTTGACAGTGATTTTACAACATTTCTCATTTGAACTTTCTCCTGCCTATGCTCATGCTCCATCTACGGTAATGACTCTTCAACCTCAATATGGCGCTCATATCATTCTGCGTAAAGTGGGTACATAA 1554 0.4054 MEEAAAAGIVITFGLIIWALKVVNWLWLRPKKIEKLLREQGLKGNPYRILIGDLKDFVKMQKDAGSKPMSFSHEIVSRVSPYVKLTVDKHGKNSFIWFGPTPWVILTDPELIKNVLNKIHDFPKPDTNPILKLLATGLVTHEGEKWSRHRRIINPSFNIEKLKIMLPIFFKSCNDLISKWEGMLSSDGSCEMDVWPFLQNFASDVISRTAFGSSYEEGRRIFQLQKEQAELTMKVMVKAYIPGWRFLPTTIHRRMKEICTDVNASLKDIIEKRERALNAGEASKNNLLDILLESNRKEIQEHGNNKNVGMNLEDIIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEVLRVFGNQKPDFDGLSQLKIVTMILYEVLRLYPPAVGLVRNVHKDVKLGNLALPAGVQVYLPPVLVHHDCELWGDDAKEFNPERFSEGVVKATKGRVSFFPFGWGPRICIGQNFSMLEARMALTVILQHFSFELSPAYAHAPSTVMTLQPQYGAHIILRKVGT* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0679 517 Pfam Cytochrome P450 88 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 SUPERFAMILY Cytochrome P450 82 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 Gene3D Cytochrome P450 27 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0679 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Lja3g0679 517 PANTHER CYTOCHROME P450-LIKE 13 513 - -
Lja3g0679 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0679 Lja-Chr3 6784116 6787828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0679 3 515 Cytochrome P450 AT3G14690 55.126 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0679 - K23809 gmx:100777623 818.15