Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0672 ATGGAAATGGAGCATGGTGATCATGGAATGGAAGGGATGATGGCACCACCAAACCATGGTGGTGCCACCACCAACATGTCCATGGGCCATCATAGCATGATGCACATGACATTCTTCTGGGGGAAGGACGCGTTGGTTCTGTTCGACGATTGGCCTGCAGGGAAAACCGGGTCGTACGCTATGGCGTTGATCCTTGTTTTCGTCATGTCTATGCTCGTTGAGGTTCTCTCACGAACCAGGTTCATCAAACGCGGAAACGTGGTTGCCACTAGTCTGATTCAGACCCTGGTTCATGCGTTCAGGGTTGGCGTGTCTTACCTTGTCATGCTTGCACTCATGTCTTTCAATGGAGGAATCTTTTTGGCTGCTGTGCTTGGTCATGCTTTAGGGTTCTTGCTCTGGAGCCCGGCTTTTCAGAAGCCAAACGAAGACCGTGAGGCTTCTCATCTTCCTCACTGTTAA 462 0.5065 MEMEHGDHGMEGMMAPPNHGGATTNMSMGHHSMMHMTFFWGKDALVLFDDWPAGKTGSYAMALILVFVMSMLVEVLSRTRFIKRGNVVATSLIQTLVHAFRVGVSYLVMLALMSFNGGIFLAAVLGHALGFLLWSPAFQKPNEDREASHLPHC* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0672 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 16 142 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja3g0672 153 Pfam Ctr copper transporter family 36 79 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja3g0672 153 Pfam Ctr copper transporter family 88 134 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja3g0672 153 PANTHER COPPER TRANSPORTER 1 16 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0672 Lja-Chr3 6745966 6746639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0672 30 153 Inorganic Solute Cotransporters AT5G59040 46.825 7.42e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0672 K14686 - gmx:100306175 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0672 3 6745966 6746639 Lja3g0672 3 6745966 6746639 ECH