Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0669 ATGGGAGCTCGTTGCTCCAAATTCTCTCTGTGTTGGTGGCCTTCCAATATCAAATCAAACCTTCATGATTTATCTCATAATGATGATGATGATGGGAGCAAGAATGAGAAAGTGGGGTTCACTGAGTACACCTTGGATCAGCTCAAAATTGCAACTTCAGGTTTTTCACCTGAGAACATTGTCTCTGAGCATGGTGAGAAAGCTCCTAATGTTGTTTATAGAGGAAGGGTTGAAGATGATAGGTTGGTTGCTGTCAAGAGGTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAAGCAAGAGCAGTGGGGCAGCTAAGGAGTGAACGATTAGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCTGAGTTCATGCCCTATGAAACTCTCTCAAGACATCTTTTTCATTGGGAGACCCAGCCGATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCACAAGCTTTGGAATACTGCAGCATTAAAGGAAGAGCATTGTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAATAGTAGAGATGGCAGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCAGAGTACTTAAGGAATGGAAGAATCACCGCCGAAAGCGTAGTTTACAGTTTTGGAACCCTGCTGCTTGATCTTCTTAGTGGAAAGCATATCCCACCCAGTCATGCGCTTGACCTTATACGAGGCAAGAACTTTCTGATGCTGATGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAATACGAGCCTCGTGAGAGACCAAATACTAAAACGCTTGTGACAGCTCTAACCCCTCTTCAAAAAGAAACCTCAGTACCTTCATCTGTTTTATTGGGCATACCAGATGGGAGTCTATCACCAAAGGAAACAATTTCATTAACACCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTAACTGAAATACATGAAATTTTGGAAAAGGTGGGTTATAAGGATGATGAAGATGTTGCAAATGAGCTGTCATTCCAAATGTGGACAAATCAAATACAAGATACACTAAATTCTAAGAAGCATGGCGATTCTGCTTTTCGTGCTAAGGACTTCTCTATGGCCATTGACTGCTATACACAATTCATCGATGGCGGGACTATGGTATCACCAACCGTGTATGCGAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCTATATCTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGTTGCCCTGTTCTTCCTTGGCATGGACAACGATGCACAGGAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAAAGCATAAATATTGA 1473 0.4291 MGARCSKFSLCWWPSNIKSNLHDLSHNDDDDGSKNEKVGFTEYTLDQLKIATSGFSPENIVSEHGEKAPNVVYRGRVEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRSERLANLVGCCCEGEERLLVAEFMPYETLSRHLFHWETQPMKWAMRLRVALYLAQALEYCSIKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRNGRITAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSGLEGHFSNDDGTELVRLASRCLQYEPRERPNTKTLVTALTPLQKETSVPSSVLLGIPDGSLSPKETISLTPFGEACSRRDLTEIHEILEKVGYKDDEDVANELSFQMWTNQIQDTLNSKKHGDSAFRAKDFSMAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAFYLQAVALFFLGMDNDAQESLKDGTTLETRKHKY* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0669 490 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Lja3g0669 490 SUPERFAMILY Protein kinase-like (PK-like) 32 314 IPR011009 -
Lja3g0669 490 Gene3D Transferase(Phosphotransferase) domain 1 135 326 - -
Lja3g0669 490 Gene3D Tetratricopeptide repeat domain 384 490 IPR011990 GO:0005515
Lja3g0669 490 Gene3D Phosphorylase Kinase; domain 1 29 133 - -
Lja3g0669 490 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 489 - -
Lja3g0669 490 SUPERFAMILY TPR-like 388 480 IPR011990 GO:0005515
Lja3g0669 490 ProSiteProfiles Protein kinase domain profile. 58 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0669 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0669 Lja-Chr3 6704458 6708389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0669 14 332 Glycoside Hydrolase AT3G07070 31.700 5.71e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lja3g0669 PK_Tyr_Ser-Thr 5.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0669 - - gmx:732542 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0669 3 6704458 6708389 Lja3g0669 3 6704458 6708389 ECH