Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0668 ATGGCTTCCATAGCATTCTCCACCGCCACCCTCCCCTCCCTCCGCCTCCGCCACCGCCACCGCCACTCCCCCAAACCGCCACTCCTCCGCCACTCCCTCAAACTAAAACCCTCCCTCCCTTCCATTTCTTCAACGTTCCCACTCTCCACCCTCTCTTCCGTTCCCAGAAAACACACCACTCTCACTGTCAGAGCCTCTTCCTCCTCCTCAGCTTCCATAACCCCAGCTCCGGTTCCCGCTCCGCCTCCGGTTCAACCATGGCAAGGTGCCGCCATCAAACCCCTCTTCGCTTCCTTAGCGATCGGTACTCTACTCTGGTACTCTCCCGTGCCAGACGGAGTCTCTCGTAACGCGTGGCAATTGCTCGCGATTTTCTTAGGAACCATCGTCGGCATCATCACGCAGCCACTGCCACTCGGCGCCGTCGCGATTTTGGGCTTAGGAGTCTCCGTTCTCACCAAAACCCTCACGTTCGCCGCCGCTTTCTCCGGCTTCGGCGACCCAATTCCCTGGCTTATCTGCCTCGCTTTCTTCTTCGCCAAAGGGTTCATCAAAACCGGCCTCGGCAACCGCGTTGCGTATCAATTCGTGTCACTCTTCGGTAGCTCGTCGTTGGGGTTGGGGTACAGTTTGGTTTTCAGCGAGGCCCTTTTGGCGCCGGCGATTCCTTCCGTTTCGGCGAGGTCCGGTGGGATTTTCCTTCCGCTGGTGAAGGCTTTGTGTGTGTCGTGTGGGAGTAACGTCGGTGATGGAACGGAGAACAGGTTGGGGTCGTGGTTGATGCTGACTTGCTTTCAGACATCGGTGATCTCGTCGGCGATGTTTCTGACGGGAATGGCGGCGAATCCGCTGTGCGCCACGCTTACTTTGAACTCCATAAACCAGACAATTGGGTGGTTGGATTGGGCTAAGGCTGCTATAGTGCCTGGTTTGGCGTCGTTGATTTTGGTGCCTTTGATCTTGTATGTTATCTACCCTCCTACCCTGAAATCTAGTCCAGATGCACCCAAGCTTGCTAGGGAGAAGTTGCAGAAAATGGGGCCTATGACAACCAATGAGAAGATCATGACTGTTACTCTGCTTCTAACGGTTGGACTTTGGATTTTTGGAGGGCTTCTTGGTATAGATGCTGTAACTTCTGCCATTCTCGGATTAGCTGTACTCCTTATCACAGGGGTTGTAACATGGAAGGAGTGCTTAGGCGAGGGAGTTGCCTGGGACACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTTATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTCGGTATTCTGGTCCTTCTCTATTTCTACTCCCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTCACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCGCCATATTTGGGAGCCATTGTGCTGTCCGTCCTCTCCAACCTTATGGGTGGCCTTACTCATTATGGGATCGGGTCAGCGCCGGTGTTTTTCGGTGCCAACTATGTTCCCCTCGCTCAGTGGTGGGGGTATGGATTCATTATTAGTATTGTTAACCTTATAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTAA 1674 0.5263 MASIAFSTATLPSLRLRHRHRHSPKPPLLRHSLKLKPSLPSISSTFPLSTLSSVPRKHTTLTVRASSSSSASITPAPVPAPPPVQPWQGAAIKPLFASLAIGTLLWYSPVPDGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARSGGIFLPLVKALCVSCGSNVGDGTENRLGSWLMLTCFQTSVISSAMFLTGMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLASLILVPLILYVIYPPTLKSSPDAPKLAREKLQKMGPMTTNEKIMTVTLLLTVGLWIFGGLLGIDAVTSAILGLAVLLITGVVTWKECLGEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPYLGAIVLSVLSNLMGGLTHYGIGSAPVFFGANYVPLAQWWGYGFIISIVNLIIWLGLGGVWWKFIGLW* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0668 557 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 12 557 - -
Lja3g0668 557 CDD ArsB_NhaD_permease 129 551 - -
Lja3g0668 557 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 12 557 IPR030676 -
Lja3g0668 557 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 109 551 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lja3g0668 557 Pfam Sodium:sulfate symporter transmembrane region 94 557 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0668 Lja-Chr3 6698853 6702541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0668 1 556 Antiporters AT5G12860 77.996 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0668 - - vun:114169835 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0668 3 6698853 6702541 Lja3g0668 3 6698853 6702541 ECH