Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0659 ATGTCCGGCAAAAAGGCTAAATTGCCACAGATAGCATTGCTTACCAGTGCTGAAATTGTTCCTGAGCCTCTGGGTCTTGTCCTCATAATTTCTTCTTGGAATTTCCCCTTTGGACTTTCCCTAGAGCCACTGATAGGAGCAGTAGCTGCTGGAAACGTAGCGGTTTTGAAGCCTTCAGAGTTATCTCCTTCATGTTCCTCTCTGCTTGCCTCTGGTCTTGCCACTTACTTGGACAATGAAGCTATTAAGGTGATTGAAGGGGGAGCAGTGGAGTCCCAGCAACTACTACACCAAAGATGGGACAAAATCTTCTTTACAGGAAGTGCACGTGTCGGGCGGATTGTGATGTCCGCAGCTGCGAAGCATCTGACCCCTGTCACTCTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGATTCCCTTTCATCTTCATGGGATTTAGAGGTGGCTGTGAAGCGGATTATGGTGGGGAAATATGGAACTTGTGCTGGTCAGGCATGCATAGCAGTTGACTATGTCCTTGTGGAAAACAGATACTGCTTAAAACTGGTGGAACTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGGTCCCACAACATTCCAACAGTATTGCAAGGATAGTGAATGAAAAACACTTCTTCAGATTGAAGAATCTTCTGACTGATCAGAAGGTCCTAAAATCAGTGGTTTATGGTGGCTCCGTGGATGAAGAAAACTTATTTATTGAGCCAACGATTTTGGTGAATCCCCCACTTGATGCAGCGATCATGTCGGATGAAATTTTCGGCCCACTACTTCCAATTATTACTCTGGATAAGATTGAGGACAGTGTTAATTTTATAAACTCAATGCCTAAACCTCTTGCCCTTTATGTTTTCACCAAAAACAAAACACTGCAGAACAGAATGATATCTGAAACATCATCTGGCAGCTTGATGTTCAACGATTCAATGCTACAATATGCAGCTGATACTCTACCATTTGGAGGAGTAGGTGAAAGTGGGTTTGGAATGTACCATGGAAAGTTCTCGTTTGACACATTCAGCCACCACAAGGGAATTGTGAGAAGGAGTTACCTCACAGATTTTTGGTATAGGTATCCTCCATGGACACTGAACAAGTTTCAGCTACTTGAGGTCTCGTACAATTATGATTATCTTGGATTGCTCCTTGTCCTGCTTGGTTTAAAGAGACCATCCAAACATAAGATCATGCCTTGCTAG 1227 0.436 MSGKKAKLPQIALLTSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNVAVLKPSELSPSCSSLLASGLATYLDNEAIKVIEGGAVESQQLLHQRWDKIFFTGSARVGRIVMSAAAKHLTPVTLELGGKCPAVVDSLSSSWDLEVAVKRIMVGKYGTCAGQACIAVDYVLVENRYCLKLVELMKVWIKKMFGEVPQHSNSIARIVNEKHFFRLKNLLTDQKVLKSVVYGGSVDEENLFIEPTILVNPPLDAAIMSDEIFGPLLPIITLDKIEDSVNFINSMPKPLALYVFTKNKTLQNRMISETSSGSLMFNDSMLQYAADTLPFGGVGESGFGMYHGKFSFDTFSHHKGIVRRSYLTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKRPSKHKIMPC* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0659 408 PANTHER ALDEHYDE DEHYDROGENASE 1 400 IPR012394 GO:0006081
Lja3g0659 408 SUPERFAMILY ALDH-like 16 372 IPR016161 GO:0016491
Lja3g0659 408 Pfam Aldehyde dehydrogenase family 17 353 IPR015590 GO:0016491
Lja3g0659 408 PANTHER ALDEHYDE DEHYDROGENASE 1 400 - -
Lja3g0659 408 PIRSF ALDH 1 391 IPR012394 GO:0006081
Lja3g0659 408 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 353 IPR016162 GO:0016491
Lja3g0659 408 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 132 335 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0659 Lja-Chr3 6557645 6560902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0659 4 399 Aldehyde Dehydrogenase Gene Family AT4G36250 55.051 1.65e-164 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0659 K00128 - gmx:100817701 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0659 3 6557645 6560902 Lja3g0659 3 6557645 6560902 ECH