Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0658 ATGGGGGCCATGGGAACTTTGGAGAGAGACCTCTATAACATGAGGGAGTATTATGAAAATGGAAACACATTAGAAGCTTCTTGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCGTAGAGAAAGAGGAAGATATGTTGAACGCCCTCTTGCATGATTTAGGGAAACACCACATGGAAGGTTATAGAGACGAGGTTGGAACTGTAATGAAGTCCTTAAATCTTGCATTGAAGTGTGTGAAAGTTTGGATGTCTGGCAAAAAGGCAAAATTGCCACAGATAGCATTGCTAACAAGTGCAGAAATTGTCCCTGAGCCTCTTGGTCTAGTCCTCATTATTTCATCTTGGAATTTCCCTTTCGGACTTTCCCTTGAGCCACTGATAGGAGCAGTAGCTGCTGGAAATGTAGCAGTCTTAAAGCCTTCAGAGTTATCTCCTGCATGTTCTGCTCTACTTGCCTCTACTCTTGTAACATACTTGGACAGTAAAGCCATTAAGGTGATCCAAGGGGGACCAGAGGAATCACAGCAACTACTGCAGCAAAGATGGGACAAAATCTTCTTCACAGGAAGTGCACGAGTGGCGAGCATTGTAATGTCTGCAGCTGCGAAGCATCTAACCCCTGTGACTCTGGAGCTGGGTGGAAAAAGCCCTGCAGTTGTGGACTCCCTTTCCTCCTCCTGGGATTTAGAGGTAGCTGTGAAGCGGATTGTTGTAGGGAAATTTGGAACATGCGGTGGTCAAGCATGCATTGCGGTCGACTATGTACTTGTGGAAAATAGATACTGTTCAACTCTGGTGGATTTGGTGAAGGTTTGGATCAAGAAAATGTTTGGAGAGAACCCAAAACATTCCAACACTATTGCGAGGATAGTGAATAAGCAACATTTCTTTAGATTGAAGAATCTTCTAGCAGATCAAAAGGTCAAAGAATCTGTGGTTTATGGTGGCTTCATGGATGAAGAAAACTTATTTATTGAGCCAACCATCTTGGTGGACCCCCCACTTGATGCAGCAATCATGTCAGAAGAAATTTTTGGCCCATTGCTTCCAATTATTACTGTGGAGAAGATTGAGGAGAGTATTAAATTCATAAAGTCCATGCCTAAGCCTCTTGCCCTTTATGTTTTTACCAAAAACCAATCATTGCAGAAAAGAATGATAACTGAAACATCATCTGGAAGTGTAACATTCAACGATGCAATTCTACTATATGCAGCTGATTCCCTTCCATTTGGAGGAGTGGGTGAAAGTGGGTTTGGCAAGTACCATGGGAAGTTCTCCTTTGACGCATTCAGCCACCAGAAAGCGATTCTCAGAAGGAGTTACCTCAGTGATTTTTGGTATAGGTATCCTCCATGGACACTAAACAAGTTTCAACTACTTGAGGTCTCTTACAATTATGATTATGTGGGGTTGCTCCTTGTCCTTCTGGGCATAAAGAGACTATCAAATCGCAGATCATATTTGGCTACCTAA 1482 0.4285 MGAMGTLERDLYNMREYYENGNTLEASWRESQLKGLRRFLVEKEEDMLNALLHDLGKHHMEGYRDEVGTVMKSLNLALKCVKVWMSGKKAKLPQIALLTSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNVAVLKPSELSPACSALLASTLVTYLDSKAIKVIQGGPEESQQLLQQRWDKIFFTGSARVASIVMSAAAKHLTPVTLELGGKSPAVVDSLSSSWDLEVAVKRIVVGKFGTCGGQACIAVDYVLVENRYCSTLVDLVKVWIKKMFGENPKHSNTIARIVNKQHFFRLKNLLADQKVKESVVYGGFMDEENLFIEPTILVDPPLDAAIMSEEIFGPLLPIITVEKIEESIKFIKSMPKPLALYVFTKNQSLQKRMITETSSGSVTFNDAILLYAADSLPFGGVGESGFGKYHGKFSFDAFSHQKAILRRSYLSDFWYRYPPWTLNKFQLLEVSYNYDYVGLLLVLLGIKRLSNRRSYLAT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0658 493 PANTHER ALDEHYDE DEHYDROGENASE 5 488 - -
Lja3g0658 493 Coils Coil 490 493 - -
Lja3g0658 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 212 219 IPR029510 GO:0016491
Lja3g0658 493 PANTHER ALDEHYDE DEHYDROGENASE 5 488 IPR012394 GO:0006081
Lja3g0658 493 Pfam Aldehyde dehydrogenase family 22 439 IPR015590 GO:0016491
Lja3g0658 493 PIRSF ALDH 3 475 IPR012394 GO:0006081
Lja3g0658 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Lja3g0658 493 SUPERFAMILY ALDH-like 15 456 IPR016161 GO:0016491
Lja3g0658 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0658 Lja-Chr3 6552938 6556822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0658 6 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.347 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0658 K00128 - gmx:100817701 787.334