Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0657 ATGGAGACGAATTGTTCTTTGGAGAGAGACCTTAATAACATGAGGGAGTATTATGGAAGTGGAAACACAAAAGAAACTTCTTGGAGAGAATCACAGCTCAAAGGGTTGCGTCGTTTCCTCATAGAAAAAGAGGAAGATATGTTGAAGGCCCTCATGCATGATTTAGGGAAACACCATGTTGAAGCTTTTAGAGATGAGATAGGAGCTTTAATGAAGTCCTTAAATCTCGCATTGAAGTGTTTCAAAGTTTGGATGTCAGGCAATAAGGCTAAATTACCAAAGTTAGTACTGCTAACAAGTGCAGAAGTTGTTCCTGAACCTCTGGGTCTCATCCTCATAATTTCATCTTGGAATTACCCTTTTGGACTGTCTCTAGAGCCACTGATAGGAGCAGTAACTGCTGGGAATGTAGTAGTCTTAAAGCCTTCAGAGTTAACTCCTTCATGTTCTGCTCTACTTGCCTCTACTCTTGCCACTTACTTGGACAGTGAAGCCATTAAGGTGATTGAAGGTGGACCACAGGAGTCTGAGCTACTACTACAGCAAAGATGGGACAAAATATTCTTTACAGGAAGTGCGCGTGTGGGGCGGATTGTAATGTCTTCAGCTGTGAAGCATCTGACCCCTGTCACTCTGGAGTTGGGTGGGAAAAACCCAGCAGTTGTTGACTCCCTTTCATCTTCCTGGGATTTAGAGGTTGCTGTGAAGCGGATTGTTTTTGGGAAATTTGGGTCATGTGCTGGTCAAACATGCATTGCGATCGACTATGTACTTGTGGAAAATAGATTCTGTTCAACACTGGTGAAATTGATAAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCGAAACAATCCAACACTATTGCAAGGATAATTAATAAACAACACTTCCTTAGATTGAAGAATCTTCTTACTGATAAAAAGGTCAAAGAATCTGTGGTTTATGGTGGCTCCATAGATGAAGAAAACTTATTTATTGAGCCAACCATATTGGTGGATCCCCCACTTGATGCAGCAATCATGTCAGAAGAAATTTTTGGCCCATTGCTTCCAATTATTACTGTTGAGAAGATTGAGGACAGTATTAAATTCATAAACTCCAGGCCTAAGCCTCTAGCCCTTTATGCTTTCACCAAAATTGAATCACTGCAGAAAAGAATGAGATCTGAAACATCATCTGGCAGTTTAACTTTCAACGATGCAATTCTACAATATGCAGTGGATTCTCTCCCGTTTGGAGGAGTGGGTGAAAGTGGGTTTGGCAATTATCATGGGAAGTTCTCCTTTAACACATTCAGCCATCAGAAGGGGATTCTCAAAAGAAGTTTCCTGAGTGGTTTTTGGTATAGGTATCCTCCATGGACACTAAACAAGTTTCAACTGCTTGAGGTCTCTTACAATTATGATTATCTGGGGTTGCTCCTTGTCCTTCTGGGCTTGAAGAGATCATCAACAAGCAGATCATATTTAGTTACCCAAATAAGTGGGGTTTTATTTTGCTTTCTCCTTGCTTTTGGTCATCACCACCACCACCACCGTCCTCTCATCACCACCACCACCATCCCTCCACTGCCACCACCGTCCTCCCTCTTCCAGGCACTACCAGATCTGAGCCCACAATCAAACTCGCCGTCAGCGACCAGACCTTCGGCGTCCTACCTTTCTCTCCTCCCCTTTCATCAGATCGGCGACCCTTGGCTTCGCCAGACCAGATCTGCAACCACCGGTCGTTCCACCACCATCCGCGACCGTCAGCCACCAGCCACCCTCCGAGATCACCGCCCGCGGTCGTGGGCCACTGCCTCTCCCCTTGGTCCTGTTTCGTTGCGCACTCCATCTCACTCCTATGGCTTGCCCTCTGCTCTTCTCTGTTCTTGTGGTGGTGTCTCATGA 1896 0.4483 METNCSLERDLNNMREYYGSGNTKETSWRESQLKGLRRFLIEKEEDMLKALMHDLGKHHVEAFRDEIGALMKSLNLALKCFKVWMSGNKAKLPKLVLLTSAEVVPEPLGLILIISSWNYPFGLSLEPLIGAVTAGNVVVLKPSELTPSCSALLASTLATYLDSEAIKVIEGGPQESELLLQQRWDKIFFTGSARVGRIVMSSAVKHLTPVTLELGGKNPAVVDSLSSSWDLEVAVKRIVFGKFGSCAGQTCIAIDYVLVENRFCSTLVKLIKVWIKKMFGENPKQSNTIARIINKQHFLRLKNLLTDKKVKESVVYGGSIDEENLFIEPTILVDPPLDAAIMSEEIFGPLLPIITVEKIEDSIKFINSRPKPLALYAFTKIESLQKRMRSETSSGSLTFNDAILQYAVDSLPFGGVGESGFGNYHGKFSFNTFSHQKGILKRSFLSGFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKRSSTSRSYLVTQISGVLFCFLLAFGHHHHHHRPLITTTTIPPLPPPSSLFQALPDLSPQSNSPSATRPSASYLSLLPFHQIGDPWLRQTRSATTGRSTTIRDRQPPATLRDHRPRSWATASPLGPVSLRTPSHSYGLPSALLCSCGGVS* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0657 631 PANTHER ALDEHYDE DEHYDROGENASE 5 487 - -
Lja3g0657 631 MobiDBLite consensus disorder prediction 571 586 - -
Lja3g0657 631 Pfam Aldehyde dehydrogenase family 27 437 IPR015590 GO:0016491
Lja3g0657 631 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 212 219 IPR029510 GO:0016491
Lja3g0657 631 SUPERFAMILY ALDH-like 12 455 IPR016161 GO:0016491
Lja3g0657 631 PANTHER ALDEHYDE DEHYDROGENASE 5 487 IPR012394 GO:0006081
Lja3g0657 631 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Lja3g0657 631 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Lja3g0657 631 MobiDBLite consensus disorder prediction 571 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0657 Lja-Chr3 6539834 6551484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0657 6 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.347 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0657 K00128 - gmx:100817701 764.222