Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0584 ATGGATTTTGGAACTGCGCATTGGACCAGAGAAGAAGACAGGCTGTTTGAACATGCCATCGGTACATTTGATGAAGATACACCCGATCTATGGCAGAAGGTGGCATCATTATTCCCTAACAAAACTGTTTTTGATGTGATCAACCACTACGAGAAATTGGAAGAAGATTTGCATGAAATAGTGACAGGGAACCACGTTTATCAATATGAAGAAAGATTTGAAGAAAGCAGCAACATTGAACACATGCAGGAGTCACATGCCTTATCTCAGGTTTCACAACTGATCATTGACGCAGAGGCAACCATACAAAGGTTGCAGAGGGAGTGTGAGGACCTCCAACAGCAGATGAAGACTATGGAGCAGCAAATAGTCCAACAGGGTGCGCGAACGGAGGAGATGTCTTCTCAGTTCTCAGTTGGAAGCTTGTCACAGCAAGTTGTAATGAGAAGGACGACCATGCATGATAACATGTAA 474 0.4367 MDFGTAHWTREEDRLFEHAIGTFDEDTPDLWQKVASLFPNKTVFDVINHYEKLEEDLHEIVTGNHVYQYEERFEESSNIEHMQESHALSQVSQLIIDAEATIQRLQRECEDLQQQMKTMEQQIVQQGARTEEMSSQFSVGSLSQQVVMRRTTMHDNM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0584 157 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 6 64 IPR043363 -
Lja3g0584 157 SMART sant 4 56 IPR001005 -
Lja3g0584 157 CDD SANT 8 53 IPR001005 -
Lja3g0584 157 Gene3D - 4 67 - -
Lja3g0584 157 Coils Coil 88 129 - -
Lja3g0584 157 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 6 64 - -
Lja3g0584 157 Pfam Myb-like DNA-binding domain 7 53 IPR001005 -
Lja3g0584 157 SUPERFAMILY Homeodomain-like 7 56 IPR009057 -
Lja3g0584 157 ProSiteProfiles Myb-like domain profile. 8 54 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lja3g0584 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0584 - - ccav:112512321 77.0257