Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0578 ATGCCTGCCATGGCTTCCTCTCTGCTTCTTCCACTCTTTTCTTGGGCAGGTTCTACTTGTGGTAAAACTCCATCTTTTACACCTCCTCAAGCCTTTGCTGTTGACAAACTTCGAAGATTACTTTTCAAAGTCAAGTCTTCAGAGACAAAGGAATGCACTGCTATGTTCAATACCAATTCACGTAGAGAGATTCTTGGTTTGGCTTTAGGAGTCTCAGGTATCTTCATCCATGCATTGGATGCTTATGGAGCTGGTTTGCCCCCAGAGGAAAAACCAAAACTATGTGATGACAATTGTGTGCGAGAGCTTGAAAATGTGCCTATGGTAACTACTGAATCAGGGTTGCAATACAAAGATATTAAAGTTGGGCAAGGCCCTAGTCCCCCAATTGGATATCAGGTGGCTGCTAATTATGTTGCCATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGCCTGCCTTACCTTTTTCGTGTTGGTTCCGGCCAGGTGATAAAAGGTCTTGATGAAGGTCTTCTGAGCATGAAGGTAGGAGGGAAGCGTCGACTGTACATACCTGGATCATTGGCATTCCCAAAAGGCCTTATTTCAGCTCCTGGAAGGCCAAGGGTGGCTCCAAGTAGTCCAGTTATATTTGATGTAAGTTTGGAATATATACCTGGGCTTGAACTTGACCTGGATGAGGAATGA 699 0.4406 MPAMASSLLLPLFSWAGSTCGKTPSFTPPQAFAVDKLRRLLFKVKSSETKECTAMFNTNSRREILGLALGVSGIFIHALDAYGAGLPPEEKPKLCDDNCVRELENVPMVTTESGLQYKDIKVGQGPSPPIGYQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGSLAFPKGLISAPGRPRVAPSSPVIFDVSLEYIPGLELDLDEE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0578 232 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 131 223 IPR001179 GO:0003755
Lja3g0578 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 38 228 - -
Lja3g0578 232 SUPERFAMILY FKBP-like 46 219 - -
Lja3g0578 232 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 38 228 - -
Lja3g0578 232 Gene3D - 103 221 IPR046357 GO:0003755
Lja3g0578 232 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 129 219 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0578 Lja-Chr3 5677821 5681740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0578 112 219 Calmodulin-binding Proteins AT3G25230 36.697 3.69e-13 66.2