Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0557 ATGGCAGCAGCATCTTCAGACGACACCAAAAACAGCAGCAGCAACCTTCCTCTGAAACCCATCCCTGGAAGCTACGGCCTCCCCTTCTTCGGAGCCATGCACGACCGCCACGACTACTTCTACAACCAAGGCCGCGACAAATTCTTCGCCACCCGAGTCGAGAAGTACAACTCCACCGTCATCCGAACCAACATGCCTCCTGGCCCCGGCATCTCCTCCGACTCCAAAGTCATCGCACTCCTCGACTCCGCCTCCTTCCCGATCCTCTTCGACAACTCCAAAGTCGAAAAACGCGACGTCCTTGACGGCACCTTCATGCCCTCCACCGGCTTCACCGGCGGCTACCGCGCCTGCGCCTTCCAAGACACCACCGAACCCTCCCACAAACTCCTCAAAACCTTCTTCATGCAAGTCCTCTCTTCCAAACACAACACCTTCCTCCCTCTCCTCCGCACCACCCTCTCCGACCACTTCTCCGATCTCGACTCCCAGCTCGCCGGAAAATCAGGAAAAGCCAGCTTCAACACCTCCATCAGCGCCGCCACGTTCAACTTCCTCTTCCTCCTCCTCACCGATAAACACCCCTCGGAAACCGTCATCGGCGACAAAGGCCCCGGCCTCGTCACCGCCTGGCTCGGAGCTCAGCTTGCACCACTCGCCACCCTCGGCCTCCCGAAAATCTTCAACTACGCCGAAGATTTCCTCATCAGAACCATCCCATTCCCGGCGTGGACAGTGAAATGGAGCTACAAGAAACTCTGCGAGGGTTTCGCTTCCGCCGGCGCGTCGCTTCTAGATGAAGCAGAGCGCGTGGGAATTAAACGAGATGAAGCGGAACACAACCTGGTTTTCATGCTCGGGTTCAACGCGTTCGGCGGGTTAACGAACCAGTTCCCGATCCTCATCAAATGGATCGGTTTAGCCGGACCGGAACTTCACGCGAAACTCGCAGAAGAGATCAGGACCGTTGTTAGGGAGTCAAACGGGGAGGTAAGTTTATCAGCGTTGGATAAGATGACTTTGACTAAATCAGTCGTCTACGAGGTACTGAGAATTGAACCGGCGGTGCCGTACCAGTATGCAAAAGCGAGGGAGGATGTGGTGGTGGAGAGTCACGATGCGGCGTTTGAGATCAAGAAAGGGGAGATGATTTTCGGGTATCAGCCGTTTGCGACGAAGGATCCGAAGGTGTTTGAGAATCCCGAGGAGTTTGTGGGCCATAGGTTTGTTGGGGAGGGAGAGAAGTTGTTGAAATATGTGTATTGGTCTAATGGCCGTGAGACGGAGGAGCCCACGGTTGATAATAAACAGTGTCCGGCGAAGAATCTGGTGGTGCTGATGTGTAGGTTGTATGTGGTGGAATTTTTCTTGAGATATGATACTTTTACTTTTGAGTTCAAGCCAGTGGTTTTGGGTCCTAATGTTACCATCGAGTCACTAACCAAGGCCACCACCACAGTCTGA 1464 0.5417 MAAASSDDTKNSSSNLPLKPIPGSYGLPFFGAMHDRHDYFYNQGRDKFFATRVEKYNSTVIRTNMPPGPGISSDSKVIALLDSASFPILFDNSKVEKRDVLDGTFMPSTGFTGGYRACAFQDTTEPSHKLLKTFFMQVLSSKHNTFLPLLRTTLSDHFSDLDSQLAGKSGKASFNTSISAATFNFLFLLLTDKHPSETVIGDKGPGLVTAWLGAQLAPLATLGLPKIFNYAEDFLIRTIPFPAWTVKWSYKKLCEGFASAGASLLDEAERVGIKRDEAEHNLVFMLGFNAFGGLTNQFPILIKWIGLAGPELHAKLAEEIRTVVRESNGEVSLSALDKMTLTKSVVYEVLRIEPAVPYQYAKAREDVVVESHDAAFEIKKGEMIFGYQPFATKDPKVFENPEEFVGHRFVGEGEKLLKYVYWSNGRETEEPTVDNKQCPAKNLVVLMCRLYVVEFFLRYDTFTFEFKPVVLGPNVTIESLTKATTTV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0557 487 Pfam Cytochrome P450 310 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0557 487 PANTHER CYTOCHROME P450 26 10 484 - -
Lja3g0557 487 Gene3D Cytochrome P450 12 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0557 487 SUPERFAMILY Cytochrome P450 17 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0557 487 PANTHER FATTY ACID HYDROPEROXIDE LYASE 10 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0557 Lja-Chr3 5507371 5509245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0557 9 484 Cytochrome P450 AT5G42650 49.476 1.55e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0557 K01723 - gmx:100810890 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0557 3 5507371 5509245 Lja3g0557 3 5507371 5509245 ECH