Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0528 ATGACTGAAGGCAAGGTAGTAACTGAAGCAGAAAATGCAAATCAGAAAAATCTTCAGGATTTTGATCCTCAAAAGAAGCCAAAGAGGAACAAGTACGCTTTTGCTTGTGCTATGCTTGCCTCCATGACTTCCATCTTGCTTGGCTATGATATTGGTGTGATGAGTGGAGCCGCCATCTACATAAAAAGAGACCTTAAAGTCAGTGATGTGAAGATTGAGATTCTGCTGGGAATCATCAACCTGTACTCGCTCATAGGCTCAGGCCTCGCCGGCAGGACTTCTGACTGGATAGGCCGCCGCTACACCATCGTTTTCGCCGGCGCAATCTTCTTCGTCGGAGCTTTACTCATGGGGTTCTCTCCGAACTATTGGTTTCTCATGTTCGGGCGGTTCATCGCCGGCATTGGTATCGGCTACGCCCTCATGATTGCCCCTGTCTATACTGCTGAGGTTTCCCCTGCTTCCTCTCGCGGCTTCCTCACCTCCTTCCCCGAGGTTTTCATAAATGGAGGGATATTACTAGGATACATATCAAACTTTGCATTCTCAAAATTGTCCCTCAAAGTAGGATGGAGAATGATGCTCGGAGTTGGCGCACTCCCATCAGTAATCCTAGGCGTCGGAGTGTTAGCCATGCCGGAGTCCCCACGGTGGTTAGTCATGAGAGGCCGCCTAGGCGACGCTATAAAAGTCCTCAACAAAACCTCAGACTCCCCTGAAGAAGCCCAGCTCCGCTTAGCCGACATTAAACGCGCCGCCGGAATCCCCGAATCCTGCACCGACGACGTCGTTGAAGTCTCCAAGAGAAGCACCGGCGAGGGAGTCTGGAAGGAGCTCTTCCTCTACCCAACCCCGGCAATCCGCCACATCGTAATCGCCGCCCTCGGCATCCACTTCTTCCAACAAGCCTCCGGCATCGACGCCGTCGTGCTATACAGCCCCACCATCTTCGAAAAAGCCGGGATCAAGAGCGACACCGATAAGCTCCTCGCCACCGTCGCCGTCGGGTTTGTGAAAACCTGTTTCATCCTCGTCGCCACCTTCATGCTCGACCGCATCGGGCGGCGGCCGTTGCTCCTCACCAGCGTCGGCGGCATGGTGCTGTCGCTCCTCACACTCGGCACCAGCCTCACGATCATCGACCGTTCAGATACCAAAGTCACGTGGGCCGTTGGATTGAGCATTGCAACGGTTTTGTCCTACGTGGCCACGTTCTCGATTGGTGCGGGGCCCATCACGTGGGTCTATAGCTCTGAGATTTTCCCGTTGAGGTTGCGAGCGCAGGGTTGTGCTATGGGAGTGGTGGTGAATCGCGTGACGAGTGGGGTCATTTCAATGACCTTTTTGTCCCTGTCGAAAGGGATTACCATTGGTGGAGCTTTCTTCCTTTTTGGAGGGATTGCGATTTGTGGCTGGATTTTCTTTTATACTATGCTTCCTGAAACTAGGGGGAAGACACTTGAAGATATGGAAGGGTCTTTTGGTCAATCCAAGTCCAAAATTAAGGGTAATAAGGGAGTTGGAAATGGGAAAGACAATGACCAAGCAGGCCAAGTTCAGTTAGGGACTAATGTCCAAACTTAG 1584 0.5221 MTEGKVVTEAENANQKNLQDFDPQKKPKRNKYAFACAMLASMTSILLGYDIGVMSGAAIYIKRDLKVSDVKIEILLGIINLYSLIGSGLAGRTSDWIGRRYTIVFAGAIFFVGALLMGFSPNYWFLMFGRFIAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNFAFSKLSLKVGWRMMLGVGALPSVILGVGVLAMPESPRWLVMRGRLGDAIKVLNKTSDSPEEAQLRLADIKRAAGIPESCTDDVVEVSKRSTGEGVWKELFLYPTPAIRHIVIAALGIHFFQQASGIDAVVLYSPTIFEKAGIKSDTDKLLATVAVGFVKTCFILVATFMLDRIGRRPLLLTSVGGMVLSLLTLGTSLTIIDRSDTKVTWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGCAMGVVVNRVTSGVISMTFLSLSKGITIGGAFFLFGGIAICGWIFFYTMLPETRGKTLEDMEGSFGQSKSKIKGNKGVGNGKDNDQAGQVQLGTNVQT* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0528 527 MobiDBLite consensus disorder prediction 494 527 - -
Lja3g0528 527 Pfam Sugar (and other) transporter 37 492 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja3g0528 527 Gene3D MFS general substrate transporter like domains 26 498 IPR036259 -
Lja3g0528 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 483 IPR020846 GO:0022857
Lja3g0528 527 SUPERFAMILY MFS general substrate transporter 22 491 IPR036259 -
Lja3g0528 527 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 19 513 IPR045262 GO:0015144
Lja3g0528 527 ProSitePatterns Sugar transport proteins signature 2. 132 157 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja3g0528 527 PRINTS Sugar transporter signature 418 430 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0528 527 PRINTS Sugar transporter signature 395 416 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0528 527 PRINTS Sugar transporter signature 301 311 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0528 527 PRINTS Sugar transporter signature 44 54 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0528 527 PRINTS Sugar transporter signature 127 146 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0528 527 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 489 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0528 527 MobiDBLite consensus disorder prediction 511 527 - -
Lja3g0528 527 PANTHER SUGAR TRANSPORTER 19 513 - -
Lja3g0528 527 CDD MFS_PLT 39 490 IPR044776 GO:0005351
Lja3g0528 527 ProSitePatterns Sugar transport proteins signature 1. 90 107 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0528 Lja-Chr3 5283921 5287086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0528 23 526 Organic Solute Cotransporters AT3G18830 74.653 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0528 - - lja:Lj3g3v3338420.1 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0528 3 5283921 5287086 Lja3g0528 3 5283921 5287086 ECH
Lja3g0528 3 5283921 5287086 Lja2g0439 2 4035309 4037911 ECH
Lja3g0528 3 5283921 5287086 Lja3g5001 3 92135253 92140357 PCT