Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0510 ATGGTGAATCTGCTAGGCATGGTGTGGTTTGGACTCTTGTTCTTGTTGCTGTTTAACTTTGAGTTCACATTGGAGCAGGTTGTTGTTGAGCCACTGAGTTCAACCGCGGAGCGAGCTGCGCTGCTCCAGCTTCGATCCTCTTTGGGCTTGAGGAGCAAGGAATGGCCAATAAAGGGTGACCCTTGTTTTATCTGGAGTGGTGTGAGTTGCCAGAATGGTAGTGTTGTTGGCATCAACATCTCTGGCTTTAGAAGAACCAGGCTTGGGAAGCAAAACCCAAAATTTTCTGTGGAAGCCTTAGCCAATCTCACCCTCTTGGAGTTTTTCAATGCCTCCAATTTTCTTCTCCCTGGTGCTATCCCTGATTGGTTTGGTCAGGGGCTACCTTCACTTACAGTGCTAGATCTTCGTTCAAGTTCAATCAATGGTGCTATTCCTTCAAGTTTTGGGAATTTAACAAGCCTCACTAGGCTCTATCTTTCTGATAACAATCTTACTGGGGTGCTTCCTGTTAGTCTTGGTCAACTCTTAGCACTTTCAGTGCTTAATCTTTCCAGAAATGCTCTTAGTGGGTCCCTGCCATCATCAATTGTCTCTCTTGTGAACCTTTCTTCCCTTGATATTTCTGATAATTATTTATCCGGGTCCATTCCCACTACCATTGGGGCACTCTCCAAGTTGCAATACTTGAATCTTTCCAATAATGGCCTAACTTCTTCTGTACCTGCAGAATTGGTCAACCTTAGTGGCTTGGTTGACCTTGATCTTAGTGAGAATTCCTTCTCTGGTGCTTTGCCAGAACAGTTGTGGTCTCTGCCGAGATTGAGCTTCCTGGATGTCTCGAGCAATAACTTCACCGGTCCACTTCCTAATTCTAGTTCAATTTTTAATTCTACTGCTAGGGAGCTCAATATTTCTCATAATATGTTTTATGGAAGCCTCAGTCCTCTGCTTAGAAGGTTCAGTTCCATTGATGTGTCAAACAATTATTTCGAGGGAAGGGTTCTAGACTTCAAGATTGATGTATATCTAGATAGCAATTGCCTCCAAAATGCAACTTATCAGAGGACACCAGTGGAATGTGCATCATTTTATGCTGACAGGGGCCTAACATTTGATAATTTCGGACGACCAAATTCATCAGGAGCTCCAGAAGCAAAAGGCTCTGGGAAGAGCAATAAAAACAAGATAATCTTGGCAGCAGTGTTGGGCGGGGTGGGCTTGATTGCAGTATTGTTGTTACTAGTACTGCTGCTTCTATGCATTCGCAGGAGAAGTAATACAAATCAAAGGGGAAATGGTGTCGGCCCCGCTCCTCCTGGTAGCAGTCCTCCACATCCTGGTGTACCAATCAACTACTCAAATGTTGGAGACTCATTTACATATCATCAGTTGCTCCAGGCCACAGGTGAATTCAAGGATGAAAATCTTATCAAACATGGGCATACTGGGGATCTCTTCAATGGTGTTTTGGAAAATGGGATTCATGTAGTTATCAAAAGGATTGACATTCGTTCGACTAAAAAGGATGATGACTTGTTGGAATTGGATTTTTTCAATAAGGTTTCTCATCCAAGATTTGTTCCCCTGTTGGGTCATTACTTAGAAAATGAGAATGAGAAGTTCCTGGTTTACAAACATATGCCAAATATGGACTTGTCAAATAGCCTGTACTACAAAAAAACGCAATCTGAAGATGATACTTTGAAGTCATTGGACTGGATAACAAGGTTGAAAATTGCCATTGGAGCAGCAGAGGCCCTATCTTATCTGCACCATGAATGTAATCCACCCATTGTTCACAGAGATATCCAAGCAAGCAGTATTCTTTTAGATGATAAGTATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCATGCCCTCAAGATGGGGATGCACATCAAAGTAAAATCACTCGGTTGCTGCGGTTGCCTCAGCCCTCTGAACAAGCCACAACTGGTACATCAACATCAGTTTGTGCCTATGACGTGTATTGCTTTGGGAAAGTGTTACTTGAACTGGTGACCGGCAAGCTAGGAATTAGTGCCTCCAGTGTTGCTGAAGAAAAACAATGGTTGGATCAGGTGCTACCTCACATTCATATTTATGACAAGGAGCTCTTGACAAAAATAGTGGATCCGTCTCTGATGGTGGATGATGATCTCTTAGAGGAAGTGTGGGCAATGGCGATTGTTGCCAAGTCTTGCCTAAATCCCAAATCTTCAAGAAGACCCCCTATGAAATATGTTCTCAGGGCTTTGGAAAACCCTCTCAGAGTTGTGAGGGAAGAAAGTTTCAGCTCATCGCGGCTCAGAACAACCTCTTCTAGAAGCTCTTGGAATGCTGCATTGTTTGGTAGTTGGCGCCATAGCTCATCGGATGTGACAGTGATTCCACCAGCCTCTGGTACACGAGTAGAAGGAGGAAGCAGTTTAAAGCGTTCCGGTACTACCGGCTCGCAGGGTAGCTTCCCGAACACTGGAGGTGACGTGTCATCACCTCGCGGGCGGCACTCGAGGGAGATATTCCCAGAACCACCTGGAGCTGATGATGTTGAGAGGCAGGAGCTGGAGTAA 2574 0.4437 MVNLLGMVWFGLLFLLLFNFEFTLEQVVVEPLSSTAERAALLQLRSSLGLRSKEWPIKGDPCFIWSGVSCQNGSVVGINISGFRRTRLGKQNPKFSVEALANLTLLEFFNASNFLLPGAIPDWFGQGLPSLTVLDLRSSSINGAIPSSFGNLTSLTRLYLSDNNLTGVLPVSLGQLLALSVLNLSRNALSGSLPSSIVSLVNLSSLDISDNYLSGSIPTTIGALSKLQYLNLSNNGLTSSVPAELVNLSGLVDLDLSENSFSGALPEQLWSLPRLSFLDVSSNNFTGPLPNSSSIFNSTARELNISHNMFYGSLSPLLRRFSSIDVSNNYFEGRVLDFKIDVYLDSNCLQNATYQRTPVECASFYADRGLTFDNFGRPNSSGAPEAKGSGKSNKNKIILAAVLGGVGLIAVLLLLVLLLLCIRRRSNTNQRGNGVGPAPPGSSPPHPGVPINYSNVGDSFTYHQLLQATGEFKDENLIKHGHTGDLFNGVLENGIHVVIKRIDIRSTKKDDDLLELDFFNKVSHPRFVPLLGHYLENENEKFLVYKHMPNMDLSNSLYYKKTQSEDDTLKSLDWITRLKIAIGAAEALSYLHHECNPPIVHRDIQASSILLDDKYEVRLGSLSEACPQDGDAHQSKITRLLRLPQPSEQATTGTSTSVCAYDVYCFGKVLLELVTGKLGISASSVAEEKQWLDQVLPHIHIYDKELLTKIVDPSLMVDDDLLEEVWAMAIVAKSCLNPKSSRRPPMKYVLRALENPLRVVREESFSSSRLRTTSSRSSWNAALFGSWRHSSSDVTVIPPASGTRVEGGSSLKRSGTTGSQGSFPNTGGDVSSPRGRHSREIFPEPPGADDVERQELE* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0510 857 PANTHER BNAA07G03560D PROTEIN 12 801 - -
Lja3g0510 857 SMART LRR_typ_2 224 247 IPR003591 -
Lja3g0510 857 SMART LRR_typ_2 152 175 IPR003591 -
Lja3g0510 857 SMART LRR_typ_2 128 151 IPR003591 -
Lja3g0510 857 SMART LRR_typ_2 176 200 IPR003591 -
Lja3g0510 857 SMART LRR_typ_2 248 272 IPR003591 -
Lja3g0510 857 MobiDBLite consensus disorder prediction 833 857 - -
Lja3g0510 857 Gene3D Phosphorylase Kinase; domain 1 451 547 - -
Lja3g0510 857 ProSiteProfiles Protein kinase domain profile. 472 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0510 857 Gene3D Ribonuclease Inhibitor 196 356 IPR032675 -
Lja3g0510 857 SUPERFAMILY Protein kinase-like (PK-like) 447 753 IPR011009 -
Lja3g0510 857 Pfam Leucine rich repeat 129 189 IPR001611 GO:0005515
Lja3g0510 857 Pfam Leucine rich repeat 202 260 IPR001611 GO:0005515
Lja3g0510 857 SUPERFAMILY L domain-like 60 332 - -
Lja3g0510 857 Gene3D Ribonuclease Inhibitor 34 195 IPR032675 -
Lja3g0510 857 MobiDBLite consensus disorder prediction 807 832 - -
Lja3g0510 857 MobiDBLite consensus disorder prediction 795 857 - -
Lja3g0510 857 Gene3D Transferase(Phosphotransferase) domain 1 548 772 - -
Lja3g0510 857 PANTHER RECEPTOR-LIKE PROTEIN 55 12 801 - -
Lja3g0510 857 MobiDBLite consensus disorder prediction 430 450 - -
Lja3g0510 857 Pfam Protein tyrosine and serine/threonine kinase 477 751 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0510 Lja-Chr3 5147243 5153243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0510 27 645 Miscellaneous Gene Families AT2G16250 53.994 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lja3g0510 PK_Tyr_Ser-Thr 3.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0510 - - fve:101300403 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0510 3 5147243 5153243 Lja3g0510 3 5147243 5153243 ECH