Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0476 ATGAAGGACGCAGATGTGTCGCAGCAGATCCAGCAGATGATCAGGTTCATCCGCCAAGAGGCCGAGGAGAAAGCCAATGAAATATCTGTTGCGGCGGAGGAGGAGTTCAATATTGAGAAACTTCAATTACTTGAAGCTGAGAAGAGAAAGATCAGACAAGAGTACGAGCGAAAAGCCAAACAAATTGATGTTCGTAGAAAGATTGAGTACTCAATGCAGCTGAATGCATCCCGTATAAAGGTTCTCCAAGCACAAGATGAGCTGGTGAATTCTATGAAGGATTCTGCTAAAAAGGGCCTTTTACGCATCTCAAATGATAAGAAAGCTTACAAGAAACTCGTCAAAGACATGATCGTTCAGGGTTTACTACGGCTGAGGGAACCATCAGTGCTACTAAGATGCAGAGAGGGTGATCGAAAGCTAGTAGAGTCTGTGCTCGATGAAGCGAAAAAACAATACTCCGAGAAAGCCAACATGCAAGCCCCAAAGGTTACCCTTGATGATCGTGTTTACCTCCCACCACCTCCTAAAAACGGTGCAACGGATTCACATGAACCTTTTTGCTCCGGAGGAGTGATATTGGCTTCTGAGGATGGGAAGATAGTGTTGGAGAACACCCTTGACGCACGTCTTGATGTCATTTTCCGCCAAAAATTGCCCGAGGCATGTTCATTATCACACACTCCTTCTATTCATTTTGTTGCATGCATAAACAGGGAAAATTTATTTTCAATTTGA 738 0.439 MKDADVSQQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDVRRKIEYSMQLNASRIKVLQAQDELVNSMKDSAKKGLLRISNDKKAYKKLVKDMIVQGLLRLREPSVLLRCREGDRKLVESVLDEAKKQYSEKANMQAPKVTLDDRVYLPPPPKNGATDSHEPFCSGGVILASEDGKIVLENTLDARLDVIFRQKLPEACSLSHTPSIHFVACINRENLFSI* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0476 245 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 223 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lja3g0476 245 Coils Coil 38 61 - -
Lja3g0476 245 Gene3D - 92 225 IPR038495 -
Lja3g0476 245 Gene3D - 1 62 - -
Lja3g0476 245 SUPERFAMILY V-type ATPase subunit E-like 87 222 - -
Lja3g0476 245 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 223 - -
Lja3g0476 245 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lja3g0476 245 Pfam ATP synthase (E/31 kDa) subunit 16 221 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lja3g0476 245 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0476 Lja-Chr3 4792239 4795306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0476 1 221 Primary Pumps ATPases(2) AT3G08560 71.041 7.25e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0476 K02150 - gmx:100791813 391.734