Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0473 ATGGAAAATGTATCAGAATTTACAAACACAATGGATAGGAATAAGGTGCTACTAGTGATGTACACTATCTTATTCTGCTTCATGCAAGATGATGATATCAGTATCACTATGGCTCAGAATCAGAAACAATTTATCAGACATGATGAGACCCTCGTTTCGCCAGACGGAACCTTCGAAGCGGGATTCTTCCACTTTGAAAATCCACAACATCACTATTTTGGTGTATGGTACAAGAGCATATCACCTAGGACAATTGTGTGGGTAGCCAACAGAGATGCCCCGTTACGAAACTCAACAGCACCAACTTTGAAGGTCACTCATAAAGGAAGCATCCTTATCCGTGATGGTGCAAAGGGTGTAATCTGGTCCACCAACACATCAAGAGCTAAAGAGCAACCTTTCATGCAGCTTTTAGACTCAGGAAACCTTGTCGCGAAAGATGGAGACAAGGGGGAGAACGTTATATGGGAAAGCTTTAATTATCCTGGTGACACTTTCCTTGCAGGAATGAAGATTAAGAGCAATTTAGCAATTGGGCCTACTAGTTATCTAACATCTTGGAGAAACTCAGAAGACCCTGCTAGTGGTGAGTTTTCATATCACATAGATATTCGTGGCTTTCCTCAACTAGTTGTTACAAAGGGAGCAGCTATAACTTTGAGAGCAGGCCCGTGGACTGGCAATAAGTTTTCCGGAGCTTTTGGGCAAGTACTGCAGAAAATCTTGACATTCTTTATGCAGTTCACTGACCAGGAAATTTCTTTAGAATATGAAACCGTGAACCGTTCAATTATAACTAGAGAAGTGATTACCCCATTAGGCACTATACAACGTTTGTTGTGGTCGGTTAGGAATCAAAGTTGGGAGATCATAGCTACTCGCCCGGTGGACCAGTGTGCAGACTATGTCTTTTGTGGTGCTAATTCCCTATGTGATACTTCTAAGAATCCCATATGTGATTGCTTGGAAGGTTTCATGCCTCAATTTCAAGCAAAATGGAATTCATTAGATTGGGCTGGTGGGTGTGTTTCAATGGAAAAATTAAGTTGTCAGAATGGAGATGGCTTTATGAAGCACACAGGAGTGAAGTTGCCAGACACATCTTCTTCTTGGTTTGGCAAGAACATGAGCCTTGATGAGTGTAGGACGTTATGTTTGCAAAACTGCTCTTGCACAGCATACGCAGGTTTAGATAATGATGTTGATAGGAGTGTCTGCTTGATTTGGTTTGGTGACATTCTGGACATGAGTAAACACCCTGACCCTGACCAAGGACAGGAGATCTACATAAGGGTGGTTGCTTCAAAGTTAGATCGTACAAGGAATAAGAAGAGCATCAATACCAAGAAGCTTGCAGGGAGTCTGGTAGTAATCATTGCATTCGTTATATTTATAACAATCCTTGGGTTGGCCATATCCACATGTATACAGAGGAAGAAGAATAAGAGAGGGGACGAAGGAATTATAAATCACTGGAAGGACAAGAGAGGGGACGAAGACATTGATTTGGCAACAATATTTGATTTTTCAACCATCTCTAGTGCCACAAATCATTTTTCTCTAAGTAATAAATTAGGTGAAGGTGGCTTTGGACCGGTCTACAAGGGCTTATTAGCAAATGGGCAGGAGATTGCTGTCAAGAGGCTTTCTAACACTTCAGGACAAGGAATGGAGGAGTTCAAAAATGAAATCAAGTTGATAGCAAGACTTCAGCACCGCAATCTTGTAAAACTTTTTGGTTGCTCTGTTCATCAAGATGAAAAGTTGTTGATCTATGAATTCATGCACAACAGAAGCTTGAATTACTTTATTTTTGATTCGACACGAAGTAAACTAGTAGATTGGAATAAGCGCCTCCAAATCATTGATGGGATTGCTCGAGGGCTTCTTTATCTTCATCAAGACTCAAGATTAAGAATCATCCACAGAGATCTGAAAACTAGTAACATTCTTCTTGATGATGAAATGAACCCAAAGATATCAGATTTTGGTTTGGCTAGAATTTTTATAGGAGATCAAGTTGAGGCTAGAACAAAGAGAGTGATGGGAACATATGGCTATATGCCTCCTGAGTATGCGGTACATGGATCTTTTTCAATAAAATCTGATGTTTTTAGCTTTGGCGTAATCGTACTTGAGATAATTAGTGGGAAGAAGATTGGGAGATTTTATGATCCTCACCATCATCTTAATCTTCTTAGTCATGCATGGAGACTATGGATTGAAGAAAGACCACTAGAGCTTGTAGACGAGTTATTAGATGATCCAGTCATCCCAACCGAAATATTACGTTATATTCATGTAGCTCTATTGTGTGTACAACGGAGACCGGAAAATAGACCTGACATGTTATCTATAGTTTTAATGTTGAATGGCGAGAAAGAACTCCCTAAGCCAAGGCTGCCTGCATTCTACACAGGAAAGCATGATCCAATTTGGTTGGGATCTCCTTCAAGGTGTTCAACTTCTATTACCATCTCATTATTAGAGGCTAGATAG 2499 0.403 MENVSEFTNTMDRNKVLLVMYTILFCFMQDDDISITMAQNQKQFIRHDETLVSPDGTFEAGFFHFENPQHHYFGVWYKSISPRTIVWVANRDAPLRNSTAPTLKVTHKGSILIRDGAKGVIWSTNTSRAKEQPFMQLLDSGNLVAKDGDKGENVIWESFNYPGDTFLAGMKIKSNLAIGPTSYLTSWRNSEDPASGEFSYHIDIRGFPQLVVTKGAAITLRAGPWTGNKFSGAFGQVLQKILTFFMQFTDQEISLEYETVNRSIITREVITPLGTIQRLLWSVRNQSWEIIATRPVDQCADYVFCGANSLCDTSKNPICDCLEGFMPQFQAKWNSLDWAGGCVSMEKLSCQNGDGFMKHTGVKLPDTSSSWFGKNMSLDECRTLCLQNCSCTAYAGLDNDVDRSVCLIWFGDILDMSKHPDPDQGQEIYIRVVASKLDRTRNKKSINTKKLAGSLVVIIAFVIFITILGLAISTCIQRKKNKRGDEGIINHWKDKRGDEDIDLATIFDFSTISSATNHFSLSNKLGEGGFGPVYKGLLANGQEIAVKRLSNTSGQGMEEFKNEIKLIARLQHRNLVKLFGCSVHQDEKLLIYEFMHNRSLNYFIFDSTRSKLVDWNKRLQIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDDEMNPKISDFGLARIFIGDQVEARTKRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVIVLEIISGKKIGRFYDPHHHLNLLSHAWRLWIEERPLELVDELLDDPVIPTEILRYIHVALLCVQRRPENRPDMLSIVLMLNGEKELPKPRLPAFYTGKHDPIWLGSPSRCSTSITISLLEAR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0473 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 193 IPR036426 -
Lja3g0473 832 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 831 - -
Lja3g0473 832 Gene3D Phosphorylase Kinase; domain 1 493 594 - -
Lja3g0473 832 SMART blect_4 42 162 IPR001480 -
Lja3g0473 832 ProSiteProfiles PAN/Apple domain profile. 350 433 IPR003609 -
Lja3g0473 832 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Lja3g0473 832 SMART serkin_6 519 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0473 832 Pfam S-locus glycoprotein domain 221 328 IPR000858 GO:0048544
Lja3g0473 832 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 831 - -
Lja3g0473 832 ProSiteProfiles Protein kinase domain profile. 519 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0473 832 ProSiteProfiles Bulb-type lectin domain profile. 36 158 IPR001480 -
Lja3g0473 832 CDD PAN_AP_plant 347 432 - -
Lja3g0473 832 Gene3D Transferase(Phosphotransferase) domain 1 595 798 - -
Lja3g0473 832 Pfam D-mannose binding lectin 84 188 IPR001480 -
Lja3g0473 832 CDD B_lectin 48 162 IPR001480 -
Lja3g0473 832 SUPERFAMILY Protein kinase-like (PK-like) 503 790 IPR011009 -
Lja3g0473 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Lja3g0473 832 Gene3D - 34 160 IPR036426 -
Lja3g0473 832 SMART ntp_6 351 432 IPR003609 -
Lja3g0473 832 Pfam PAN-like domain 350 416 IPR003609 -
Lja3g0473 832 CDD STKc_IRAK 525 792 - -
Lja3g0473 832 PIRSF SRK 8 832 IPR024171 GO:0004674
Lja3g0473 832 Gene3D Hepatocyte Growth Factor 346 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0473 Lja-Chr3 4770882 4777473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0473 442 805 Receptor kinase-like Gene Family AT4G23190 50.806 1.07e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g0473 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0473 - - lja:Lj3g3v3375760.2 1680.23