Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0468 ATGAAGCAAATGAAGAAGTCAAGGTCAGTTAAGTTATCTGATTTAGAGGTTTTCCGATCACCATCTCCATGGAGGAGCTTATCACAACCAAGTAAGCCACCACCTCTTGATGTTCCAGCCACTGAAGCATCATCACAAAAGTACAATCCTTCAGTAAGAAGGTTGCACAATTACATGAAGCCTACTTGCAGTTCAGATGCAAAAAAGGGGCTTTTGCCGGTGAGTATTCAGAATACCCAATCTGGTTCAGATGGTAAGAATCTACCACAAAAATGTTTGAGTAATTCCTCTGTTTCTAGCAAAAAACCTTCAAAAACTTTGACCAGATCATCTACCTTAAAGCCTTGTAGCGGTTATCCTATAAAATCAACAATAGCAGTTAAGCAAGAAGATGTTAATCCACAAGAGAAAGCTACCTGCTCTTCAACTTTGAAAGACTCCAAGTTCCCCACGTACCTCATGCTTAATCCTGGGGGTACCGAGTCTGAGGGAACTTCAGTCATGAAGGTTTGCCGTTATACATATTGTTCTCTCAACAGTCATCACCATGCTCGTTTGCCTCAACTGAATAGCTTCATGTCAGCCAGGAGGCGTCTTTTGGAAACTCAGAAGAGTGTAAAGCTGGAAGCTCCTAAAAGATTGAAGGTTCCCTGTGAGACAAAGAATGCCTCTGATATTGACCAGGTAGCCTTTGATGGAGAACTTGCAAGTGATGAAGCAGATAGGGGTAACCCGACACCCTTGTTGCGAGAAATTGATATGGGTTTCTTTATTGAAATCTATGCCAAGGAAAAGCAACAAGCTGGCAGAATCGGAAGATTTGAATCCGTCAAACACGGTGAGGATCAAGAAGATATCATGTTTGCGATTGAGGAAAATGGCAAGGCAGCAGAAAATGATGGAGTCAAGCAAGCTATTCCAAGCGTACCTCATGATCTCCCCAAGTCTGAGACTAGTATTGAGGAGGATTTGAAAAACTACTTTGATGTTGCTGCCATTGAAGAAGATGCCAAAGGAAGCCTTCATCAGAAACAGAATGCTGAAGTTGCAGATAAGAACCACTCACCCAGCTGGTTTCATGAAGAAATATGCATGGGAAGCTACTTCAGTGAGGTTAGCTATGATGGGGAATACATGGAAAATATTGAATTGGATGATTCTGATTCTCAAGATACAGATATGAATTGGGAGGAGGAACAGTTTAGTGCATGTGACTACAAACAAGAAATTGATTCTTCTGTCATCATGCAGAAGACTGGCTCAAAATTTGAGGCTTCATCAGAGAGTTTGTGTGGTATATCTGAAATGTGGTTAGATGACATCCTTAGCAACCATTACGCGGACATTCTGGTTGAAGTAGCACTCCAAGCAGTCAAAGAAGAGAAAAACACCCATTTTGAAGCGCAAACACATGGCACTAAGTCTGTCCTGGAAGACATCGAGTTCAACACTCAAGAAACAGATCATTTGTCCAACGCCGCAAGTCATGAGCATGACCAATCTTCAACAGAGGAAGTATTTGAGCATTTTACAAACACAAGAGATAACAATAGAGAAAGCGAAAAACACATGGACAATGAGGTACTTGATGAAGATGCAATTGAAAATTGTGAAGGCCACACGAACAGTGAAACTTTTGCGATTGATGAGAGCTGTGAAGACAGCAACCCAAGCCTAGAGATAAATGATGAAGGACTTAGCCAGGAGAACCTAATTAACTTGTCTGCTGAGCCCAAAGAAAGTTCCATTATTATTCAGGACCAGGAATTGTTGGAGGAAGATCAAGTTAGGGTCAGTAGGTTCCATACCAGCTGCGTAGATAGTGAACAGCAGAACACAGGCAAGAACTGGAAATGGGCAGTTAGGCACAAGAGACCTGACCAAGATAATGAGGAAGTGAGAAGGATCAACCCTCGAAAGCCAAATTTTCTTCCCTTGAATCCTGATCCAGAACCAGAAAAGGTTGACCTGAAGCATCAAATGATAGATGAAAGAAAACATGCAGATGAATGGATGCTTGATTTTGCATTGAGACAAGCTGTCACAAAACTTGTTCCAGCTGGGAAAATGAAGGTAGCACTACTCGTGGAAGCTTTTGAAACAGTAATGTCAATACCCAAATGTGAAGCCCATATTAGAAACAATTCACCTTTTGTTCATGTAAGACCTATTCAAGCTTGTAGCTAA 2187 0.4152 MKQMKKSRSVKLSDLEVFRSPSPWRSLSQPSKPPPLDVPATEASSQKYNPSVRRLHNYMKPTCSSDAKKGLLPVSIQNTQSGSDGKNLPQKCLSNSSVSSKKPSKTLTRSSTLKPCSGYPIKSTIAVKQEDVNPQEKATCSSTLKDSKFPTYLMLNPGGTESEGTSVMKVCRYTYCSLNSHHHARLPQLNSFMSARRRLLETQKSVKLEAPKRLKVPCETKNASDIDQVAFDGELASDEADRGNPTPLLREIDMGFFIEIYAKEKQQAGRIGRFESVKHGEDQEDIMFAIEENGKAAENDGVKQAIPSVPHDLPKSETSIEEDLKNYFDVAAIEEDAKGSLHQKQNAEVADKNHSPSWFHEEICMGSYFSEVSYDGEYMENIELDDSDSQDTDMNWEEEQFSACDYKQEIDSSVIMQKTGSKFEASSESLCGISEMWLDDILSNHYADILVEVALQAVKEEKNTHFEAQTHGTKSVLEDIEFNTQETDHLSNAASHEHDQSSTEEVFEHFTNTRDNNRESEKHMDNEVLDEDAIENCEGHTNSETFAIDESCEDSNPSLEINDEGLSQENLINLSAEPKESSIIIQDQELLEEDQVRVSRFHTSCVDSEQQNTGKNWKWAVRHKRPDQDNEEVRRINPRKPNFLPLNPDPEPEKVDLKHQMIDERKHADEWMLDFALRQAVTKLVPAGKMKVALLVEAFETVMSIPKCEAHIRNNSPFVHVRPIQACS* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0468 728 SMART CaM_binding_2 592 704 IPR012417 GO:0005516
Lja3g0468 728 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 2 728 IPR044681 GO:0005516
Lja3g0468 728 MobiDBLite consensus disorder prediction 71 113 - -
Lja3g0468 728 MobiDBLite consensus disorder prediction 1 113 - -
Lja3g0468 728 Pfam Plant calmodulin-binding domain 606 704 IPR012417 GO:0005516
Lja3g0468 728 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 2 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0468 Lja-Chr3 4730169 4732537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0468 590 728 Calmodulin-binding Proteins AT2G38800 43.357 1.25e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0468 - - gmx:102670203 839.721