Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0464 ATGGGAGAGGTGGCGCGTGGTGGAGGTTGTTGTCCTCCGATGGATCTGTTCCGTTCCGAGCCGATGCAACTCGTTCAACTCATCATCCCCATCGAATCTGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATTCAGAGAAGAGCCCTTTTCAACGGACTTATGCAGCTCAGATAAAAAGATGTGGAGAGATGGCTCGCAAATTGCGATTTTTCAAGGAACAAATGTTGAAGGCAGGTGTTTCACCAAAACTGTCTACAACACAGGTTGATGTGAACATTGATAACCTTGAGGTAAAACTTTCAGAGATCGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAATTGCAACGCTCATACAATGAACTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGAGTTTTTCCACTCAGCTCAAAGCGGTGCCATAGAACAGCAGAGGGAATATGAATCTCGCCTTTTGAGTGGTGAATCTATGGAAACACCTTTATTACAGGATCAAGAGTTGTCAGGTGATTCATCGAAGCAAATTAAGTTGGGGTTTCTCGCAGGTCTTGTTCCCAGGGAAAAGTCCATGACATTTGAGAGAATCTTATTTCGTGCTACTAGAGGCAATGTATTCTTGAGGCAGACTGCTGTTGAGGATCCTGTCACTGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTGTTTGTGGTCTTCTATGCCGGTGAAAAAGTCAAAGCAAAGATTCTGAAAATCTGTGATGCTTTTAGTGCTAATCGCTACCCTTTTGCTGAGGAACTGGGAAAACAAGCTCAAATGATTACAGAGGCTTCTGGAAAAATTTCAGAATTGAAGACCACCATAGATACTGGACTCCAGCACCGGGTTAACTTGCTAGATACTATTGGCGTGCAATTCGAGCAGTGGAATCTTTTGGTCAGGAAGGAGAAATCCATTCACCATACCCTGAATATGCTAAGCCTTGATGTGACAAAAAAATGTCTTGTGGCTGAGGGGTGGAGCCCTGTTTTTGCAACAAAGCAGATCCAGGATGCATTACAGCGGGCAGCAGTTGACTCTAATTCTCAAGTCAGTGCCATTTTCCAAGTTCTGCATACTAAGGAGATGCCACCTACCTATTTTCGCACAAACAAGTTTACTTCTTCATATCAAGGAATTATTGATTCATATGGGGTTGCTAAATATCAGGAGGCAAATCCTACTGTGTATACTGTAGTTACCTTTCCATTTCTCTTTGCCGTGATGTTTGGTGACTGGGGACATGGAATATGTTTACTACTGGCAGCTCTATATTTCATCATCAGGGAGAGAAAACTTTCTAGCCAGAAACTTGATGACATCACAGAGATGACTTTTGGAGGTCGTTATGTTATTTTGTTGATGTCACTCTTCTCGATCTACACTGGTTTGATCTATAATGAGTTCTTTTCTGTCCCATTTGAACTCTTTGGTCCCTCTGCGTACGAATGCCGTGATCTTGCTTGCAGTGAAGCAACAACAATTGGTCTGATAAAAGCGCGACGCACGTACCCTTTTGGGGTGGATCCTGTTTGGCATGGTACACGAAGTGAATTGCCATTCCTAAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTAGCGCAGATGAACCTTGGAATTATAATGAGCTTTTTTAATGCCATATTCTTTAGGAACAGCGTAAACATATGGTTCCAATTTATTCCCCAAATGATATTTCTCAACAGTCTATTTGGCTACCTATCCCTTCTTATCATTGTAAAGTGGTGTACTGGTTCTCAAGCTGATTTGTACCATGTAATGATCTACATGTTCCTAAGCCCAACAGACGATTTGGGTGAAAACGAACTCTTTGCTGGTCAGAAAAATCTGCAGCTTGTGCTTTTGCTTCTGGCTGTTGTCGCTGTGCCCTGGATGCTGTTGCCAAAGCCTTTTATTTTGAAGAAGCAACACGAAGCTAGACACGGTGCAGAATCCTATGCGCCACTTCCGAGCACAGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGGCATGAGGAATTTGAGTTCAGTGAAATTTTTGTACATCAGCTCATACACACCATAGAATTTGTACTTGGAGCAGTATCTAATACAGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTGTTCTACGAGAAGGTTCTGCTTCTGGCATGGGGGTACAATAATGTGATTATCCTGATAGTCGGTATCCTTGTCTTCATTTTCGCTACCGTTGGAGTGTTGCTTGTTATGGAAACTTTGAGTGCCTTCTTGCATGCGCTTCGACTTCACTGGGTGGAGTTCCAAAACAAGTTTTATGAGGGCGATGGTTACAAGTTCTTTCCTTTCTCGTTCTCATTGCTAGACGAAGAGGATGAAGTGCTTTAA 2469 0.4297 MGEVARGGGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKRCGEMARKLRFFKEQMLKAGVSPKLSTTQVDVNIDNLEVKLSEIESELTEMNANGEKLQRSYNELVEYKLVLQKAGEFFHSAQSGAIEQQREYESRLLSGESMETPLLQDQELSGDSSKQIKLGFLAGLVPREKSMTFERILFRATRGNVFLRQTAVEDPVTDPVSGEKTEKNVFVVFYAGEKVKAKILKICDAFSANRYPFAEELGKQAQMITEASGKISELKTTIDTGLQHRVNLLDTIGVQFEQWNLLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALQRAAVDSNSQVSAIFQVLHTKEMPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIRERKLSSQKLDDITEMTFGGRYVILLMSLFSIYTGLIYNEFFSVPFELFGPSAYECRDLACSEATTIGLIKARRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSFFNAIFFRNSVNIWFQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENELFAGQKNLQLVLLLLAVVAVPWMLLPKPFILKKQHEARHGAESYAPLPSTEESLQVESNHDSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDEVL* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0464 822 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 7 820 - -
Lja3g0464 822 PIRSF ATP6V0A1 12 821 IPR026028 GO:0000220|GO:0046961
Lja3g0464 822 PANTHER VACUOLAR PROTON ATPASES 7 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lja3g0464 822 Coils Coil 102 129 - -
Lja3g0464 822 Pfam V-type ATPase 116kDa subunit family 40 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0464 Lja-Chr3 4709243 4718323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0464 14 820 Primary Pumps ATPases(2) AT4G39080 79.604 0.0 1327