Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g0463 | ATGATGCTAGGCCAAGAAGTAAAGGGATCAAGATGTCAAGAGTGTGGGAACCAAGCCAAGAAGGGTTGTGCATACTCAAGGTGCAGAACTTGCTGCAACAACAAAGGTTTTCAGTGCCAAACCCATGTTAGAAGCACTTGGATTCCTGTCGATAGAAGGCGCCACCGATTAATGGAGCATCAACCACCTCCCACAACTAATAATCCACACCACCTTCATGAAGATATCCCTCAAAGCCACAACCAGAACCCATTTACAAGTTTAGAGGAGTTGAAATTTCCAGAAGCTATGAGTTCCATGGCGGTATTCAGCAGTGTTCGCGTGCGATCCATGGATGACTCGGTTAATGAAATGGCCTATCAAACATCTGTGAACATTGGAGGACATAGATTTAGTGGGATTCTTTATGATCAAGGCCCTGAACAACAAAGCCTTAATGCTAGCCCTCTTGATCAGCATCAAAATCTCAATCTTACCACAATCCACAGCCATGATGGTGCAACTATGGCTCCACCATCATCATCAGCCACTGCTGCTCATGAACTTTTTTTTCCTCAGCCGCGCTCATTAGCTTCCTTCAGGTCTGGTGTGCCATATTTTTCACACACAAAACCATAA | 618 | 0.4482 | MMLGQEVKGSRCQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRRRHRLMEHQPPPTTNNPHHLHEDIPQSHNQNPFTSLEELKFPEAMSSMAVFSSVRVRSMDDSVNEMAYQTSVNIGGHRFSGILYDQGPEQQSLNASPLDQHQNLNLTTIHSHDGATMAPPSSSATAAHELFFPQPRSLASFRSGVPYFSHTKP* | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g0463 | 205 | PANTHER | BNAC01G23660D PROTEIN | 6 | 194 | - | - | |
Lja3g0463 | 205 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 6 | 194 | IPR007818 | GO:0003700|GO:0006355 | |
Lja3g0463 | 205 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 12 | 53 | IPR006510 | - | |
Lja3g0463 | 205 | Pfam | Domain of unknown function (DUF702) | 9 | 141 | - | - | |
Lja3g0463 | 205 | TIGRFAM | LRP1_Cterm: LRP1 C-terminal domain | 92 | 140 | IPR006511 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g0463 | Lja-Chr3 | 4698463 | 4699524 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g0463 | 12 | 148 | C2H2 Transcription Factor Family | AT2G18120 | 47.887 | 2.85e-42 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SRS | Lja3g0463 | DUF702 | 7.8e-44 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja3g0463 | - | - | gmx:100790751 | 247.284 |