Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0445 ATGGCAGAATTGATGAAAAACCCAATGGACCTTCAAAAGGTCCAACAAGAGCTCGAGGATGTTGTGGGCTTGGATCGAATGCTCGACGAATCAGATCTCGAAAAATTGACGCACCTCAAGTGTGTCATCAACGAAACCTTGCGCATCCACCCTCCCATTCTGTTGCTCCTCCATGAGGCCGCAGAGGACAACGTTGTGGCGGGCTACCTCATCCCAAAGGCAACACGAGTCTGGATCAACACATGGGCCATAAGCCGGTCCGAAAGTGCGTGGACAGACCCACACACATTCAACCCATCGAGGTTCCTGACAGACTTCCAAAGTAGCAACTTCGAGTTCCTTACTTTCGGGTCGGGCCGAAGGTCATGCCCTGGCATGGGCCTCGGGCTCTACACTTTGGAAATGACATTGGCTAGCTTGCTTTATTGTTTCAAGTGGGAGTTGCCGAATGGAATGAAGCCCAATGAGCTTGATATGAATGATGTGTTTGGGCTTACCACTCCAAGAGCAGTTCAGCTTGTTGCTGTGCCAAGTTATGGTCTGAATTGTCCTCTTCTTAGGTGTTAG 567 0.5009 MAELMKNPMDLQKVQQELEDVVGLDRMLDESDLEKLTHLKCVINETLRIHPPILLLLHEAAEDNVVAGYLIPKATRVWINTWAISRSESAWTDPHTFNPSRFLTDFQSSNFEFLTFGSGRRSCPGMGLGLYTLEMTLASLLYCFKWELPNGMKPNELDMNDVFGLTTPRAVQLVAVPSYGLNCPLLRC* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0445 188 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 PRINTS P450 superfamily signature 123 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 PRINTS P450 superfamily signature 114 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 Gene3D Cytochrome P450 1 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 SUPERFAMILY Cytochrome P450 1 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 PANTHER CYTOCHROME P450 84A1-RELATED 1 186 - -
Lja3g0445 188 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 PRINTS E-class P450 group I signature 123 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 PRINTS E-class P450 group I signature 80 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 PRINTS E-class P450 group I signature 113 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0445 188 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 116 125 IPR017972 GO:0005506|GO:0016705
Lja3g0445 188 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 186 - -
Lja3g0445 188 Pfam Cytochrome P450 2 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0445 Lja-Chr3 4541915 4542481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0445 1 185 Monolignol Biosynthesis Gene Families AT4G36220 62.434 5.72e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0445 K09755 - fve:101305825 256.914