Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0428 ATGGGTGGTGATAGTGAAGATGCGAACCATAGTGAAATGATGCAGAGGCTTCACTCTTGTTCTTCTTCGTTTCTGAAACAAGGTGGTAATAGGAGCATGGAGCAGTTGAATATACCTCAGTTTAATGCCTCGCAAATGCGAGGGAGGCACCATTTTCATAATCAGGGTTTGGGTGGTGGTGGAGAAGGTAACAACAACAACAACAACAATAGCAAGCGAGCTGGGATGCCACCTTCTCATCCTAACCAGATCCTTCCCATTTCACCGTATTCTCAGATCCCTGTTTCAAGGTCTCAAATGGGTGGTTCTTCTTCTTCTTCACCTGCACCTACGCATTCGCGATCACTCTCGCAACCTTCTTCGTTTTTCAACCTTGATTCTCTTCCCCCTCTTAGTCCTTCTCCGTTTCGTGATTCGTCTTCGACCTCTATGTCTGACCCTGCTTCTGGTGATGTGTCAATGGAGGATCGCTGCGATGTGAGCTCGCACTCTCTGCTTCCTCCGACATCGCCTTTCGCGAGAGGGGTTGCGGTTAACAATCACAGCAACCACCGTGTTGGGGAGAGTTTGCCGCCGAGGAAAGCGCACAGGCGTTCTAACAGTGATATCCCTTTTGGGTTTTCCACTGTTCTGCAGTCTTCGCCGCCGCTGATTCCTCTCAGGGGTTCGGTTTTGAACCGAGAGCCTGCACTTTTGGTGAAGAAGGAGAGTGCTTGGGAGAGGGGTGGTGTTGACCACAATGTGGAGGGTTCTGGGGAGAAGAAGTCCCCGGAAGGGGAGGTTGTGGATGATCTTTTCTCTGCTTACATGAACTTGGATAACATTGATGTTCTTAATAATAACATGGATGAGAAAAACTGCGCTGAAAATCGCGATGATTTGGATAGTAGTAGAGCGAGTGGAAACAAGACTGGGGGTGAGAGTAGTGATAATGAGGCAGAAAGCAGTGTTAATGAAAGTGGGGATAGTATGCAAAGGCAGAGGGAAGGGGTTAAGAGAAGTGCTGGTGGTGATGTTGCACCAACTAGCAGGCACTACAGGAGTGTCTCCATGGATAGTTTCATTGGGAAGTTGAACTTCAATGATGATGCCTCTAAGCTTCCACATTCATCTGGATTGATTTCACCTGGGAGTGGAGTTGATGGGAATTCCGCGGCTTTCAGCTTGGAGTTTGGAAATGGGGAATTCAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATAGCCATGGCAGATCCAAAGCGTGCAAAGAGGATTTTGGCGAATCGGCAATCAGCTGCACGTTCCAAAGAGCGGAAGATGCGTTACATTTCAGAACTAGAACACAAGGTCCAGACTCTTCAGACAGAAGCCACTACACTATCTGCACAGCTTACTTTGTTGCAGAGAGATTCTGTTGGACTCACTAACCAGAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAGGCCAAACTCCGAGATGCACTAAACGAGGCGCTTACTGCTGAGGTTCAAAGACTGAAGCTTGCTACAGCTGAGCTGAATGGGGAGTCACACCCTTCTAGCTGCTTGATTCCTCAACATTCTGTCAACCCTCTCATGTTCCAGCAGCAACAACAGCAGCAGCAACAAAACATTCATCTTCAGCAACAGCAGCAGCAGAATGGTAATGCCATCTCAAAGACCGACTTAAAACAATAA 1704 0.4754 MGGDSEDANHSEMMQRLHSCSSSFLKQGGNRSMEQLNIPQFNASQMRGRHHFHNQGLGGGGEGNNNNNNNSKRAGMPPSHPNQILPISPYSQIPVSRSQMGGSSSSSPAPTHSRSLSQPSSFFNLDSLPPLSPSPFRDSSSTSMSDPASGDVSMEDRCDVSSHSLLPPTSPFARGVAVNNHSNHRVGESLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGSVLNREPALLVKKESAWERGGVDHNVEGSGEKKSPEGEVVDDLFSAYMNLDNIDVLNNNMDEKNCAENRDDLDSSRASGNKTGGESSDNEAESSVNESGDSMQRQREGVKRSAGGDVAPTSRHYRSVSMDSFIGKLNFNDDASKLPHSSGLISPGSGVDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGESHPSSCLIPQHSVNPLMFQQQQQQQQQNIHLQQQQQQNGNAISKTDLKQ* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0428 567 MobiDBLite consensus disorder prediction 59 77 - -
Lja3g0428 567 MobiDBLite consensus disorder prediction 1 170 - -
Lja3g0428 567 MobiDBLite consensus disorder prediction 85 149 - -
Lja3g0428 567 Gene3D - 418 470 - -
Lja3g0428 567 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 417 480 IPR004827 GO:0003700|GO:0006355
Lja3g0428 567 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 88 555 - -
Lja3g0428 567 MobiDBLite consensus disorder prediction 14 49 - -
Lja3g0428 567 MobiDBLite consensus disorder prediction 286 344 - -
Lja3g0428 567 Coils Coil 435 469 - -
Lja3g0428 567 CDD bZIP_plant_RF2 420 469 IPR044759 GO:0003700|GO:0006355
Lja3g0428 567 Coils Coil 498 518 - -
Lja3g0428 567 MobiDBLite consensus disorder prediction 536 567 - -
Lja3g0428 567 SUPERFAMILY Leucine zipper domain 419 470 IPR046347 GO:0003700|GO:0006355
Lja3g0428 567 Pfam bZIP transcription factor 419 473 IPR004827 GO:0003700|GO:0006355
Lja3g0428 567 MobiDBLite consensus disorder prediction 299 324 - -
Lja3g0428 567 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 88 555 - -
Lja3g0428 567 SMART brlzneu 415 479 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0428 Lja-Chr3 4399427 4404732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0428 3 538 bZIP Transcription Factor Family AT4G38900 56.206 3.10e-169 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g0428 bZIP_1 6.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0428 - - gmx:778145 666.766