Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0427 ATGTCCTCCATGGCTGCATCTTCCTCCCTCTCCACTTTCTCTCCTTCCTCTTCCCTCTCCAAACCCTCCCCTCTCTCTCCTCCTCCTACCACCACCCGCTTCTTCACCAAAACCCTCCCAAAACCCACCCTCTCTCGCGCCGCCGCCAGACCCCCCTTCATCACTTCCTACAAAAACTACTTCTCCGACGCTGTCTCCTCCAACAACGCCACCCCACCACCGCAAATCCACTCCGATGATGATGACGAGAAGCCCCGGGAGGAGTGTGGGGTTGTGGGCATATACGGTGACCCTGAAGCCTCTCGCCTCTGCTACCTCGCCCTTCACGCGCTGCAACACCGTGGCCAGGAAGGTGCTGGTATTGTCACCGTCAACGACAGCAACGTGCTTCAGTCAATCACCGGTGTCGGGCTTGTCTCCGATGTCTTCAACGAGTCCAAGCTGGATCAGTTACCAGGTAGTTTGGCTATTGGGCATGTTCGTTATTCCACTGCAGGGCAATCCATGTTGAAGAATGTTCAGCCTTTTGTTGCTGGGTACCGTTTTGGTTCTGTTGGGGTTGCTCACAATGGGAATTTGGTGAACTACCGCACCTTGAGGGCTAAGCTTGAAGAGAGAGGTTCCATTTTCAACACTACTTCTGATACTGAGGTTGTGCTTCATTTGATTGCTACCTCGAAGCATAGGCCTTTCATTTTGAGGATTGTTGATGCTTGTGAGAAGCTTGAAGGGGCTTATTCTATTGTGTTTGTGACTGAGGATAAGCTTGTTGCGGTGAGGGATCCGTTCGGGTTTCGGCCTTTGGTTATGGGGAGGAGGAGCAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCCCTTGATTTGATTGAAGCTACTTATGAGAGGGAGGTTTACCCTGGTGAGGTTTTGGTGGTGGATAAAAATGGGATTCAATCCCTTTGCCTCATGGCTCACCCTGAGCCGAAGCAGTGTATCTTTGAGCATATTTACTTTGCTTTGCCCAATTCTGTGGTTTTTGGGAGGTCAGTGTATGATTCTAGGAGGCAATTTGGTGAGATATTGGCCACTGAGAGCCCTGTGGATTGTGATGTTGTGATTGCAGTTCCTGATTCTGGTGTTGTTGCTGCGCTTGGTTATGCTGCCAAAGCTGGGGTTCCTTTTCAGCAGGGGCTGATCAGGTCACACTATGTTGGAAGGACCTTCATTGAGCCATCTCAGAAGATTAGGGACTTTGGTGTGAAGTTGAAGCTCTCACCGGTTCGTGCCGTGCTTGAAGGCAAGAGGGTTGTGGTTGTTGATGACTCAATTGTGAGAGGAACTACCTCATCCAAGATTGTGAGGTTGCTGAAGGAGGCTGGTGCTAAGGAAGTTCACATGAGGATTGCTAGTCCTCCAATTATTGGTTCATGTTATTATGGGGTGGATACTCCTAGCTCTGAGGAGTTGATCTCTAATAGGATGAGCACGGAGGAGATAAGGGAGTTTATTGGATCAGATTCACTTGCTTTTCTGCCAATTAATAGCTTGCAGGGTCTGTTAGGCAAGGACTCTCCCAATTTCTGTTATGCTTGTTTCTCTGGGAAGTACCCTGTTGAGCCAAGAGAACTTAAGGTGAAGAGGGTTGGTGACTTTGTGGATGATGGGTTGAATGGGAGTTTGGAGTCTATTGATGGTGGCTGGGTTCAAGCAAACAGAAATCACATAGAGGTGAAGGCTGCTACTGGTCTTTAA 1734 0.4925 MSSMAASSSLSTFSPSSSLSKPSPLSPPPTTTRFFTKTLPKPTLSRAAARPPFITSYKNYFSDAVSSNNATPPPQIHSDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNDSNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEERGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGIQSLCLMAHPEPKQCIFEHIYFALPNSVVFGRSVYDSRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSTEEIREFIGSDSLAFLPINSLQGLLGKDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNHIEVKAATGL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0427 577 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g0427 577 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 31 562 - -
Lja3g0427 577 MobiDBLite consensus disorder prediction 1 47 - -
Lja3g0427 577 Pfam Phosphoribosyl transferase domain 364 459 IPR000836 -
Lja3g0427 577 Pfam Glutamine amidotransferase domain 168 287 IPR017932 -
Lja3g0427 577 CDD PRTases_typeI 352 463 IPR000836 -
Lja3g0427 577 MobiDBLite consensus disorder prediction 65 87 - -
Lja3g0427 577 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 89 531 IPR029055 -
Lja3g0427 577 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 89 309 IPR017932 -
Lja3g0427 577 CDD GPATase_N 89 340 IPR035584 -
Lja3g0427 577 SUPERFAMILY PRTase-like 325 536 IPR029057 -
Lja3g0427 577 Hamap Amidophosphoribosyltransferase [purF]. 88 530 IPR005854 GO:0004044|GO:0009113
Lja3g0427 577 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 89 325 IPR029055 -
Lja3g0427 577 Gene3D - 349 513 IPR029057 -
Lja3g0427 577 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 31 562 - -
Lja3g0427 577 TIGRFAM purF: amidophosphoribosyltransferase 89 531 IPR005854 GO:0004044|GO:0009113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0427 Lja-Chr3 4394126 4396340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0427 68 563 PRT Gene Family AT2G16570 84.909 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0427 K00764 - gmx:100801720 947.577